Implementation of mdrun utility functionality

Collaboration diagram for Implementation of mdrun utility functionality:

Description

This module contains code that implements general infrastructure for mdrun that does not suit any other module.

Classes
class	gmx::MDModules
	Manages the collection of all modules used for mdrun. More...

Files
file	handlerestart.cpp
	This file declares functions for mdrun to call to manage the details of doing a restart (ie. reading checkpoints, appending output files).
file	handlerestart.h
	This file declares functions for mdrun to call to manage the details of doing a restart (ie. reading checkpoints, appending output files).
file	mdmodules.h
	Declares gmx::MDModules.
file	threadaffinity.h
	Declares functions for managing mdrun thread affinity.