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file | bonded.cpp |
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file | bonded.h |
| This file contains declarations necessary for low-level functions for computing energies and forces for bonded interactions.
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file | disre.cpp |
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file | disre.h |
| Declares functions for handling distance restraints.
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file | listed-forces.cpp |
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file | listed-forces.h |
| This file contains declarations of high-level functions used by mdrun to compute energies and forces for listed interactions.
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file | listed-internal.cpp |
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file | listed-internal.h |
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file | manage-threading.cpp |
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file | manage-threading.h |
| Declares functions for managing threading of listed forces.
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file | orires.cpp |
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file | orires.h |
| Declares functions for handling orientation restraints.
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file | pairs.cpp |
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file | pairs.h |
| This file declares functions for "pair" interactions (i.e. listed non-bonded interactions, e.g. 1-4 interactions)
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file | position-restraints.cpp |
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file | position-restraints.h |
| This file contains declarations necessary for low-level functions for computing energies and forces for position restraints.
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file | restcbt.cpp |
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file | restcbt.h |
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