Here is a list of all documented class members with links to the class documentation for each member:
- p -
- p
: gmx_ana_poscalc_t
, gmx_ana_selvalue_t
, t_partition
, t_methoddata_kweval
, t_methoddata_distance
, t_methoddata_permute
- p1
: t_methoddata_merge
- p2
: t_methoddata_merge
- PairDistanceModuleData()
: gmx::analysismodules::anonymous_namespace{pairdist.cpp}::PairDistanceModuleData
- paragraphBreak()
: gmx::HelpWriterContext
- parallelDataStarted()
: gmx::IAnalysisDataModule
, gmx::AnalysisDataModuleParallel
, gmx::AnalysisDataProxy
, gmx::AnalysisDataSimpleHistogramModule
, gmx::AnalysisDataWeightedHistogramModule
- parallelizationFactor()
: gmx::AnalysisDataParallelOptions
- parallelSelection()
: gmx::TrajectoryAnalysisModuleData
- parallelSelections()
: gmx::TrajectoryAnalysisModuleData
- param
: gmx::SelectionTreeElement
, gmx_ana_selmethod_t
, gmx::ExponentialDistribution< RealType >
, gmx::GammaDistribution< RealType >
, gmx::NormalDistribution< RealType >
, gmx::TabulatedNormalDistribution< RealType, tableBits >
, gmx::UniformIntDistribution< IntType >
, gmx::UniformRealDistribution< RealType >
- param_type()
: gmx::UniformRealDistribution< RealType >::param_type
, gmx::ExponentialDistribution< RealType >::param_type
, gmx::GammaDistribution< RealType >::param_type
, gmx::NormalDistribution< RealType >::param_type
, gmx::TabulatedNormalDistribution< RealType, tableBits >::param_type
, gmx::UniformIntDistribution< IntType >::param_type
- parent_
: gmx::internal::OptionsImpl::Group
, gmx::internal::OptionsImpl
- pargsToOptions()
: gmx::anonymous_namespace{pargs.cpp}::OptionsAdapter
- parse()
: gmx::CommandLineParser
- parseFromFile()
: gmx::SelectionCollection
- parseFromStdin()
: gmx::SelectionCollection
- parseFromString()
: gmx::SelectionCollection
- parseInteractive()
: gmx::SelectionCollection
- parseRequestedFromFile()
: gmx::SelectionOptionManager
- parseRequestedFromStdin()
: gmx::SelectionOptionManager
- parseRequestedFromString()
: gmx::SelectionOptionManager
- path
: gmx::InstallationPrefixInfo
- path_
: gmx::test::TestReferenceChecker::Impl
- pbc
: gmx_sel_evaluate_t
, t_swap
- pbcNone_
: gmx::test::SettleTest
- pbcXYZ_
: gmx::test::SettleTest
- pc
: gmx::SelectionTreeElement
, t_methoddata_pos
- pcc
: gmx_ana_selcollection_t
, t_methoddata_pos
- pcrd
: t_UmbrellaHeader
- pendingLimit_
: gmx::internal::AnalysisDataStorageImpl
- perm
: t_methoddata_permute
- phi
: t_cosines
- pl_h2d_c
: gmx_wallclock_gpu_t
- pl_h2d_cj4
: cl_timers
- pl_h2d_excl
: cl_timers
- pl_h2d_sci
: cl_timers
- pl_h2d_t
: gmx_wallclock_gpu_t
- placeSelectionsInRequests()
: gmx::SelectionOptionManager::Impl
- plan
: gmx_fft_fftw3
- plist
: gmx_nbnxn_cuda_t
, gmx_nbnxn_ocl_t
- plotFormat()
: gmx::AnalysisDataPlotSettings
- plotSettings
: gmx::TrajectoryAnalysisSettings::Impl
, gmx::TrajectoryAnalysisSettings
- pmedata
: pme_setup_t
- pointer
: gmx::AlignedAllocator< T >
, gmx::ArrayRef< T >
, gmx::ConstArrayRef< T >
- pointsAdded()
: gmx::AnalysisDataFrameAverageModule
, gmx::IAnalysisDataModule
, gmx::AnalysisDataModuleSerial
, gmx::AnalysisDataModuleParallel
, gmx::AnalysisDataProxy
, gmx::AnalysisDataAverageModule
, gmx::AnalysisDataDisplacementModule
, gmx::internal::BasicAverageHistogramModule
, gmx::AnalysisDataSimpleHistogramModule
, gmx::AnalysisDataWeightedHistogramModule
, gmx::AnalysisDataBinAverageModule
, gmx::AnalysisDataLifetimeModule
, gmx::AbstractPlotModule
, gmx::AnalysisDataVectorPlotModule
, gmx::analysismodules::anonymous_namespace{select.cpp}::IndexFileWriterModule
, gmx::AnalysisDataPlotModule
- pointSet()
: gmx::AnalysisDataFrameRef
, gmx::test::AnalysisDataTestInputFrame
, gmx::internal::AnalysisDataStorageFrameData
- pointSetCount()
: gmx::AnalysisDataFrameRef
, gmx::internal::AnalysisDataStorageFrameData
, gmx::test::AnalysisDataTestInputFrame
- port
: t_gmx_IMD
- pos
: t_UmbrellaWindow
, gmx::SelectionTreeElement
- posCount()
: gmx::internal::SelectionData
, gmx::Selection
- position()
: gmx::Selection
- PositionCalculationCollection()
: gmx::PositionCalculationCollection
- positionsDatabase_
: anonymous_namespace{shake.cpp}::ShakeTest
- PositionSymbol
: gmx::SelectionParserSymbol
- prepareMdpFieldValues()
: gmx::test::MdrunComparisonFixture
- prepareMdpFile()
: gmx::test::MdrunComparisonFixture
- prependContext()
: gmx::GromacsException
, gmx::anonymous_namespace{exceptions.cpp}::ErrorMessage
- present()
: gmx::AnalysisDataPointSetRef
, gmx::AnalysisDataFrameRef
, gmx::test::AnalysisDataTestInputPointSet
- presentAllData()
: gmx::test::AnalysisDataTestFixture
- presentData()
: gmx::AnalysisDataModuleManager::Impl
- presentDataFrame()
: gmx::test::AnalysisDataTestFixture
- prev
: gmx_ana_poscalc_t
- prev_pos_kw
: gmx_sel_lexer_t
- printBinaryInformation
: gmx::BinaryInformationSettings
- printDebugInfo()
: gmx::Selection
- printInfo()
: gmx::Selection
- printThanks()
: gmx::CommandLineModuleManager::Impl
- printTree()
: gmx::SelectionCollection
, gmx::PositionCalculationCollection
- printXvgrInfo()
: gmx::SelectionCollection
- PrivateImplPointer()
: gmx::PrivateImplPointer< Impl >
- processAll()
: gmx::OptionStorageTemplate< T >
, gmx::AbstractOptionStorage
- processCommonOptions()
: gmx::CommandLineModuleManager::Impl
- processItem()
: gmx::test::TestReferenceChecker::Impl
- processMarkup()
: gmx::HelpWriterContext::Impl
- processSet()
: gmx::AbstractOptionStorage
, gmx::OptionStorageTemplate< T >
- processSetValues()
: gmx::OptionStorageTemplate< T >
- program
: gmx_device_runtime_data_t
- programContext_
: gmx::CommandLineModuleManager::Impl
- programName()
: gmx::test::anonymous_namespace{testinit.cpp}::TestProgramContext
, gmx::anonymous_namespace{programcontext.cpp}::DefaultProgramContext
, gmx::CommandLineProgramContext
, gmx::IProgramContext
- pselstr
: gmx_sel_lexer_t
- ptr
: gmx_ana_selvalue_t
, gmx_sel_mempool_block_t
- ptype
: t_mdatoms
- pull_type
: t_pullcoord
- pupdate
: gmx_ana_selmethod_t