Here is a list of all documented class members with links to the class documentation for each member:
- d -
- d2a
: gmx::analysismodules::anonymous_namespace{sasa.cpp}::t_conect
- d2b
: gmx::analysismodules::anonymous_namespace{sasa.cpp}::t_conect
- data()
: gmx::ArrayRef< T >
, gmx_sparsematrix
, gmx::ConstArrayRef< T >
- data_
: gmx::internal::AnalysisDataStorageImpl
, gmx::test::AnalysisDataTestFixture
, gmx::internal::AnalysisDataHandleImpl
- DataFileFinder
: gmx::DataFileOptions
, gmx::DataFileFinder
- DataFileInfo()
: gmx::DataFileInfo
- DataFileOptions()
: gmx::DataFileOptions
- dataFinished()
: gmx::AnalysisDataModuleSerial
, gmx::AnalysisDataModuleParallel
, gmx::AnalysisDataProxy
, gmx::AnalysisDataAverageModule
, gmx::AnalysisDataFrameAverageModule
, gmx::AnalysisDataDisplacementModule
, gmx::internal::BasicAverageHistogramModule
, gmx::AnalysisDataSimpleHistogramModule
, gmx::AnalysisDataWeightedHistogramModule
, gmx::AnalysisDataBinAverageModule
, gmx::AnalysisDataLifetimeModule
, gmx::AbstractPlotModule
, gmx::analysismodules::anonymous_namespace{select.cpp}::IndexFileWriterModule
, gmx::IAnalysisDataModule
- dataHandle()
: gmx::TrajectoryAnalysisModuleData
- DataProperty
: gmx::AnalysisDataModuleManager
- dataPropertyAboutToChange()
: gmx::AnalysisDataModuleManager
- dataSet()
: gmx::AnalysisDataFrameLocalDataHandle< ValueType >
- DatasetContainer
: gmx::TrajectoryAnalysisModule::Impl
- datasetCount()
: gmx::TrajectoryAnalysisModule
- dataSetCount()
: gmx::AbstractAnalysisData
, gmx::AnalysisDataFrameLocalDataHandle< ValueType >
, gmx::test::AnalysisDataTestInput
- datasetFromIndex()
: gmx::TrajectoryAnalysisModule
- datasetFromName()
: gmx::TrajectoryAnalysisModule
- DataSetHandle
: gmx::AnalysisDataFrameLocalDataHandle< ValueType >
, gmx::AnalysisDataFrameLocalData< ValueType >
- dataSetIndex()
: gmx::AnalysisDataPointSetRef
, gmx::test::AnalysisDataTestInputPointSet
- datasetNames()
: gmx::TrajectoryAnalysisModule
- datasetNames_
: gmx::TrajectoryAnalysisModule::Impl
- datasets_
: gmx::TrajectoryAnalysisModule::Impl
- dataStarted()
: gmx::IAnalysisDataModule
, gmx::AnalysisDataModuleSerial
, gmx::AnalysisDataProxy
, gmx::AnalysisDataAverageModule
, gmx::AnalysisDataFrameAverageModule
, gmx::AnalysisDataDisplacementModule
, gmx::internal::BasicAverageHistogramModule
, gmx::AnalysisDataBinAverageModule
, gmx::AnalysisDataLifetimeModule
, gmx::AbstractPlotModule
, gmx::analysismodules::anonymous_namespace{select.cpp}::IndexFileWriterModule
- DataStorageRequester()
: gmx::test::anonymous_namespace{mock_datamodule.cpp}::DataStorageRequester
- deallocate()
: gmx::AlignedAllocator< T >
- debug_buffer
: gmx_nbnxn_ocl_t
- debugLevel()
: gmx::CommandLineCommonOptionsHolder
- debugLevel_
: gmx::SelectionCollection::Impl
- defaultBasename()
: gmx::FileNameOption
- defaultEnumIndex()
: gmx::StringOption
- defaultExtension()
: gmx::FileNameOptionInfo
, gmx::FileNameOptionStorage
- defaultFileName_
: gmx::FileNameOptionManager::Impl
- defaultNiceLevel()
: gmx::CommandLineModuleSettings
- defaultRealTolerance()
: gmx::test::FloatingPointTolerance
- defaultSelectionText()
: gmx::SelectionOption
- defaultTolerance_
: gmx::test::TestReferenceChecker::Impl
- defaultType()
: gmx::FileNameOption
- defaultValue()
: gmx::OptionTemplate< T, U >
, gmx::BooleanOptionInfo
, gmx::BooleanOptionStorage
- defaultValueIfSet()
: gmx::OptionTemplate< T, U >
- defaultValueIfSetExists()
: gmx::AbstractOptionStorage
- DefaultValueIfSetIndex
: gmx::AbstractOptionStorage
- defining_atomnames
: gmx_help_make_index_group
- deltaQ
: t_swap
- desc
: t_pargs
- description()
: gmx::OptionTemplate< T, U >
, gmx::AbstractOptionStorage
, gmx::SelectionOptionManager::Impl::SelectionRequest
- destroy()
: gmx::AlignedAllocator< T >
- detect()
: gmx::CpuInfo
, gmx::HardwareTopology
- dev
: gmx::HardwareTopology::Device
- dev_info
: gmx_nbnxn_ocl_t
, gmx_nbnxn_cuda_t
- dev_rundata
: gmx_nbnxn_ocl_t
- device_name
: gmx_device_info_t
- device_vendor
: gmx_device_info_t
- device_version
: gmx_device_info_t
- deviceId
: gmx::HardwareTopology::Device
- devices
: gmx::HardwareTopology::Machine
- didOutput()
: gmx::TextTableFormatter
- difference_type
: gmx::ArrayRef< T >
, gmx::AlignedAllocator< T >
, gmx::ConstArrayRef< T >
- dim
: t_pullcoord
, t_pbc
- dir
: gmx::DataFileInfo
- DirectoryEnumerator()
: gmx::DirectoryEnumerator
- disableInputOptionChecking()
: gmx::FileNameOptionManager
- discard()
: gmx::ThreeFry2x64General< rounds, internalCounterBits >
- dispersion_shift
: cu_nbparam
, cl_nbparam
, cl_nbparam_params
- displayName()
: gmx::IProgramContext
, gmx::anonymous_namespace{programcontext.cpp}::DefaultProgramContext
, gmx::CommandLineProgramContext
, gmx::test::anonymous_namespace{testinit.cpp}::TestProgramContext
- dist
: swap_compartment
- distance2()
: gmx::AnalysisNeighborhoodPair
- distArray_
: gmx::analysismodules::anonymous_namespace{pairdist.cpp}::PairDistanceModuleData
- distccut
: t_methoddata_insolidangle
- distribution_type
: gmx::ExponentialDistribution< RealType >::param_type
, gmx::UniformIntDistribution< IntType >::param_type
, gmx::UniformRealDistribution< RealType >::param_type
, gmx::NormalDistribution< RealType >::param_type
, gmx::TabulatedNormalDistribution< RealType, tableBits >::param_type
, gmx::GammaDistribution< RealType >::param_type
- domain
: gmx::HardwareTopology::Device
- done()
: gmx::AbstractAverageHistogram
- DoubleOption()
: gmx::DoubleOption
- DoubleOptionInfo()
: gmx::DoubleOptionInfo
- DoubleOptionStorage()
: gmx::DoubleOptionStorage
, gmx::DoubleOption
- dt
: t_UmbrellaOptions
, t_UmbrellaWindow
, gmx::AnalysisDataDisplacementModule::Impl
- dvdl
: f_thread_t
- dx()
: gmx::test::AnalysisDataTestInputFrame
, gmx::AnalysisDataPointSetRef
, gmx::AnalysisDataFrameHeader
, gmx::AnalysisNeighborhoodPair
, gmx::AnalysisDataFrameRef
- dxdf
: VsiteThread
- dy()
: gmx::AnalysisDataFrameRef
, gmx::AnalysisDataPointSetRef
- dynamicMask()
: gmx::SelectionOption