Removed features

Removed hybrid GPU+CPU nonbonded mode

This mode was not very useful, since it ran the non-local non-bonded interactions on the CPU. The fraction of non-local interaction is set by the domain decomposition, so this is not flexible. Also this mode was not being tested.

Updated application clock handling on Pascal+ GPUs

Starting with Pascal (CC >= 6.0) it is no longer possible to change application clocks without root privileges. Application clocks are still reported for Pascal+, but there is no longer suggestions about changing them.

Removed continuation from gmx convert-tpr

Removed the obsolete option of gmx convert-tpr to write a tpr file for continuation using a trajectory and energy file. This is superseded by checkpointing.