Here is a list of all documented class members with links to the class documentation for each member:
- b -
- b
: t_pargs
, gmx_ana_indexmap_t
, gmx_ana_selvalue_t
, gmx::UniformRealDistribution< RealType >
, gmx::UniformIntDistribution< IntType >::param_type
, gmx_ana_poscalc_t
, gmx::UniformIntDistribution< IntType >
, gmx::UniformRealDistribution< RealType >::param_type
- bAcceptBooleanNoPrefix_
: gmx::OptionsAssigner::Impl
- back()
: gmx::internal::SimdArrayRef< T >
, gmx::ArrayRef< T >
- BalanceRegion()
: BalanceRegion
- bAllowMissing_
: gmx::AnalysisDataModuleManager::Impl
- bAllowPositionalArguments_
: gmx::CommandLineParser::Impl
- bAllowReduceIact
: t_UmbrellaOptions
- baros_integral
: t_state
- Base()
: gmx::KeyValueTreeTransformRuleBuilder::Base
- baseData()
: gmx::internal::AnalysisDataStorageFrameData
- baseid
: gmx_ana_poscalc_t
- baseLatency
: gmx::HardwareTopology::Numa
- Basic
: gmx::HardwareTopology
- BasicAverageHistogramModule()
: gmx::internal::BasicAverageHistogramModule
- BasicAverageHistogramModulePointer
: gmx::internal::BasicHistogramImpl
- BasicHistogramImpl()
: gmx::internal::BasicHistogramImpl
- BasicVector()
: gmx::BasicVector< ValueType >
- bAuto
: t_UmbrellaOptions
- bBoolNo
: gmx_sel_lexer_t
- bBuffer
: gmx_sel_lexer_t
- bCalcTauInt
: t_UmbrellaOptions
- bCmdStart
: gmx_sel_lexer_t
- bConnected
: t_gmx_IMD
- bContrib
: t_UmbrellaWindow
- bCumulative_
: gmx::AnalysisDataLifetimeModule::Impl
- bCycl
: t_UmbrellaOptions
- bDataProperty_
: gmx::AnalysisDataModuleManager::Impl
- bDirectList
: gmx_ga2la_t
- bDoTime
: gmx_nbnxn_cuda_t
, gmx_nbnxn_ocl_t
- begin()
: gmx::internal::SimdArrayRef< T >
, gmx::ArrayRef< T >
- beginIterator()
: gmx::SelectionParserSymbolTable
- bEquil
: df_history_t
- beta
: gmx::test::AwhTestParameters
, gmx::GammaDistribution< RealType >::param_type
, gmx::GammaDistribution< RealType >
- betak
: gmx::DimParams
- bEval
: gmx_ana_poscalc_t
- bExternalGroupsSet_
: gmx::SelectionCollection::Impl
- bFirst
: gmx::AnalysisDataDisplacementModule::Impl
- bFirstRow_
: gmx::TextTableFormatter::Impl
- bForceActivated
: t_gmx_IMD
- bFromDefaultDir
: gmx::DataFileInfo
- bGroups
: gmx_sel_lexer_t
- bHidden_
: gmx::CommandLineHelpContext::Impl
- bHistOnly
: t_UmbrellaOptions
- bias
: gmx::BiasCoupledToSystem
, gmx::PointState
- Bias()
: gmx::Bias
- bias_
: gmx::test::BiasTest
- BiasCoupledToSystem()
: gmx::BiasCoupledToSystem
- biasIndex()
: gmx::Bias
, gmx::BiasParams
- BiasParams()
: gmx::BiasParams
- BiasReader()
: BiasReader
- BiasState()
: gmx::BiasState
- biasState_
: gmx::test::BiasStateTest
- BiasStateTest()
: gmx::test::BiasStateTest
- BiasTest()
: gmx::test::BiasTest
- BiasWriter()
: gmx::BiasWriter
- bin
: t_partition_item
, t_methoddata_insolidangle
- binaryInfoSettings()
: gmx::CommandLineCommonOptionsHolder
- binaryName_
: gmx::CommandLineModuleManager::Impl
- binCount()
: gmx::AnalysisHistogramSettingsInitializer
, gmx::AnalysisHistogramSettings
- bind()
: gmx::RepeatingOptionSectionHandle< T >
- bInit_
: gmx::PositionCalculationCollection::Impl
- bInitPotByIntegration
: t_UmbrellaOptions
- bInputCheckingDisabled_
: gmx::FileNameOptionManager::Impl
- bins
: t_UmbrellaOptions
- bInUse_
: gmx::test::internal::TestReferenceDataImpl
- binWidth()
: gmx::AnalysisHistogramSettingsInitializer
, gmx::AnalysisHistogramSettings
- block_index
: f_thread_t
, bonded_threading_t
- block_nalloc
: f_thread_t
, bonded_threading_t
- blockDataList()
: gmx::CorrelationTensor
- blockDataListSize()
: gmx::CorrelationGrid
- blockLength()
: gmx::CorrelationBlockData
- BlockLengthMeasure
: gmx::CorrelationGrid
- blockLengthMeasure
: gmx::CorrelationGrid
- blockstack
: gmx_sel_mempool_t
- blockstack_nalloc
: gmx_sel_mempool_t
- blockSumSquareWeight()
: gmx::CorrelationBlockData
- blockSumWeight()
: gmx::CorrelationBlockData
- blockSumWeightX
: gmx::CorrelationBlockData::CoordData
- bLog
: t_UmbrellaOptions
- bMatchBool
: gmx_sel_lexer_t
- bMatchOf
: gmx_sel_lexer_t
- bMultipoint_
: gmx::AbstractAnalysisData::Impl
- bNewForces
: t_gmx_IMD
- bNonLocalStreamActive
: gmx_nbnxn_ocl_t
- bonded_max_nthread_uniform
: bonded_threading_t
- BooleanOption()
: gmx::BooleanOption
- BooleanOptionInfo()
: gmx::BooleanOptionInfo
- BooleanOptionStorage()
: gmx::BooleanOptionStorage
- boolt
: gmx::SelectionTreeElement
- bOrires
: t_mdatoms
- box
: gmx_pme_comm_n_box_t
, t_state
, t_pbc
- box_rel
: t_state
- boxScaler
: PmeShared
- boxv
: t_state
- boxVolume
: PmeGpuDynamicParams
- bParallel
: gmx::AnalysisDataModuleManager::Impl::ModuleInfo
- bParallelModules_
: gmx::AnalysisDataModuleManager::Impl
- bPBC
: t_methoddata_pos
, gmx::TrajectoryAnalysisSettings::Impl
- bPerturbed
: t_mdatoms
- bPrefetchLjParam
: gmx_nbnxn_ocl_t
- bPrintCOM
: t_UmbrellaHeader
- bPrintComp
: t_UmbrellaHeader
- bPrintHeader_
: gmx::TextTableFormatter::Impl
- bPrintRefValue
: t_UmbrellaHeader
- bProf0Set
: t_UmbrellaOptions
- bPullx
: t_UmbrellaOptions
- bQM
: t_mdatoms
- bQuiet_
: gmx::CommandLineModuleManager::Impl
- brandString()
: gmx::CpuInfo
- bRmPBC
: gmx::TrajectoryAnalysisSettings::Impl
- broadcast()
: gmx::BiasState
- bSelfTestMode_
: gmx::test::internal::TestReferenceDataImpl
, gmx::test::TestReferenceChecker::Impl
- bSendAtom
: gmx_domdec_specat_comm_t
- bSendAtom_nalloc
: gmx_domdec_specat_comm_t
- bSerialModules_
: gmx::AnalysisDataModuleManager::Impl
- bSet
: t_pargs
- bShiftVecUploaded
: cl_atomdata
, cu_atomdata
- bSkipUnknown_
: gmx::CommandLineParser::Impl
- bSorted
: t_methoddata_same
- bSourceLayout
: gmx::InstallationPrefixInfo
- bsp_mod
: PmeShared
- bsSeed
: t_UmbrellaOptions
- bStatic
: gmx_ana_indexmap_t
- bsWeight
: t_UmbrellaWindow
- bSym
: t_UmbrellaOptions
- bTakeComplement
: gmx_help_make_index_group
- bTerminatable
: t_gmx_IMD
- bTerminated
: t_gmx_IMD
- buffer
: gmx_sel_lexer_t
, gmx_sel_mempool_t
- bugs_
: gmx::CommandLineHelpWriter::Impl
- build()
: gmx::KeyValueTreeValueBuilder
, gmx::LoggerBuilder
, gmx::KeyValueTreeBuilder
- builder()
: gmx::internal::AnalysisDataStorageFrameData
- builder_
: gmx::KeyValueTreeTransformRuleBuilder::Base
- builders_
: gmx::internal::AnalysisDataStorageImpl
- buildMdpOutput()
: gmx::anonymous_namespace{electricfield.cpp}::ElectricField
, gmx::IMdpOptionProvider
, gmx::MDModules
, gmx::anonymous_namespace{electricfield.cpp}::ElectricFieldData
- bUpToDate
: ekinstate_t
- bus
: gmx::HardwareTopology::Device
- bUse
: t_coordselection
- bUseGPU
: nonbonded_verlet_t
- bUseTwoStreams
: gmx_nbnxn_ocl_t
, gmx_nbnxn_cuda_t
- bVCMgrps
: t_mdatoms
- bWConnect
: t_gmx_IMD
- bWrap_
: gmx::TextTableFormatter::Impl::ColumnData