- r -
- range()
: gmx::AnalysisHistogramSettingsInitializer
- RangeError()
: gmx::RangeError
- rbegin()
: gmx::ArrayRef< T >
- readAll()
: gmx::TextReader
- readDouble()
: gmx::test::TestReferenceChecker
- readFileToString()
: gmx::TextReader
- readFloat()
: gmx::test::TestReferenceChecker
- reading()
: gmx::ISerializer
- readInt64()
: gmx::test::TestReferenceChecker
- readInteger()
: gmx::test::TestReferenceChecker
- readLine()
: gmx::TextInputStream
, gmx::StandardInputStream
, gmx::TextInputFile
, gmx::StringInputStream
, gmx::TextReader
- readString()
: gmx::test::TestReferenceChecker
- readUChar()
: gmx::test::TestReferenceChecker
- readWriteFlags()
: gmx::FileNameOption
- redirectStringToStdin()
: gmx::test::StdioTestHelper
- refId()
: gmx::SelectionPosition
- refIds()
: gmx::Selection
- refIndex()
: gmx::AnalysisNeighborhoodPair
- Regex()
: gmx::Regex
- registerAnalysisDataset()
: gmx::TrajectoryAnalysisModule
- registerAwhWithPull()
: gmx::Awh
- registerBasicDataset()
: gmx::TrajectoryAnalysisModule
- registerModule()
: gmx::CommandLineModuleManager
, gmx::TrajectoryAnalysisCommandLineRunner
- registerModuleDirect()
: gmx::ICommandLineOptionsModule
- registerModuleFactory()
: gmx::ICommandLineOptionsModule
- registerOption()
: gmx::SelectionOptionManager
- registerSubTopic()
: gmx::AbstractCompositeHelpTopic
- reinitializeOnSpawnedThread()
: gmx::Mdrunner
- relativeToleranceAsFloatingPoint()
: gmx::test::FloatingPointTolerance
- relativeToleranceAsPrecisionDependentUlp()
: gmx::test::FloatingPointTolerance
- relativeToleranceAsUlp()
: gmx::test::FloatingPointTolerance
- rend()
: gmx::ArrayRef< T >
- RepeatingOptionSection()
: gmx::RepeatingOptionSection< T >
- RepeatingOptionSectionHandle()
: gmx::RepeatingOptionSectionHandle< T >
- representativeItem()
: gmx::UnionFinder
- representativeValue()
: gmx::MappedUnionFinder
- requestOptionDelayedParsing()
: gmx::SelectionOptionManager
- requestStorage()
: gmx::AnalysisDataStorage
, gmx::AbstractAnalysisData
- requestStorageInternal()
: gmx::AbstractAnalysisData
- required()
: gmx::OptionTemplate< T, U >
- requiredTopologyProperties()
: gmx::SelectionCollection
- requiresIndexGroups()
: gmx::SelectionCollection
- resampleDoubleBinWidth()
: gmx::AbstractAverageHistogram
- reserve()
: gmx::MDAtoms
- reset()
: GpuRegionTimerWrapper< framework >
, gmx::TabulatedNormalDistribution< RealType, tableBits >
, GpuRegionTimerImpl< framework >
, gmx::PrivateImplPointer< Impl >
, gmx::ExponentialDistribution< RealType >
, gmx::AnalysisNeighborhoodSearch
, gmx::UniformIntDistribution< IntType >
, gmx::GammaDistribution< RealType >
, gmx::NormalDistribution< RealType >
, gmx::UniformRealDistribution< RealType >
- resize()
: gmx::MDAtoms
- restart()
: gmx::ThreeFry2x64General< rounds, internalCounterBits >
- restoreStateFromHistory()
: gmx::Awh
- rootChecker()
: gmx::test::CommandLineTestBase
, gmx::test::TestReferenceData
- rootObject()
: gmx::KeyValueTreeBuilder
- rootSection()
: gmx::Options
- roundRange()
: gmx::AnalysisHistogramSettingsInitializer
- rowCount()
: gmx::AbstractAnalysisArrayData
- rules()
: gmx::KeyValueTreeTransformRulesScoped
- run()
: gmx::CommandLineModuleManager
, gmx::ICommandLineOptionsModule
, gmx::ICommandLineModule
- runAsMain()
: gmx::TrajectoryAnalysisCommandLineRunner
, gmx::ICommandLineOptionsModule
- runAsMainCMain()
: gmx::CommandLineModuleManager
- runAsMainCMainWithSettings()
: gmx::CommandLineModuleManager
- runAsMainSingleModule()
: gmx::CommandLineModuleManager
- runModuleDirect()
: gmx::test::CommandLineTestHelper
- runModuleFactory()
: gmx::test::CommandLineTestHelper
- runTest()
: gmx::test::MdrunComparisonFixture