- s -
- safe_exp()
: expfit.cpp
- safe_expm1()
: expfit.cpp
- save_calloc()
: smalloc.h
- save_calloc_aligned()
: smalloc.h
- save_free()
: smalloc.h
- save_free_aligned()
: smalloc.h
- save_malloc()
: smalloc.h
- save_malloc_aligned()
: smalloc.h
- save_realloc()
: smalloc.h
- search_str()
: strdb.h
- searchCumulative()
: gmx_wham.cpp
- select_nbnxn_kernel()
: nbnxn_ocl.cpp
- selectPruneKernel()
: nbnxn_ocl.cpp
- set()
: parser_internal.h
- set_atoms()
: indexutil.cpp
- set_box_rel()
: state.h
- set_cg_boundaries()
: partition.cpp
- set_cutoff_parameters()
: nbnxn_ocl_data_mgmt.cpp
- set_dd_cell_sizes()
: cellsizes.h
- set_dd_cell_sizes_slb()
: cellsizes.h
- set_dd_corners()
: partition.cpp
- set_dd_dlb_max_cutoff()
: dlb.h
, partition.cpp
- set_ddbox()
: box.cpp
, box.h
- set_ddbox_cr()
: box.cpp
, box.h
- set_dlb_limits()
: dlb.cpp
, dlb.h
- set_empty()
: parser_internal.h
- set_evaluation_function()
: compiler.cpp
- set_expr_value_store()
: params.cpp
- set_no_exclusions_zone()
: domdec_topology.cpp
- set_over_alloc_dd()
: smalloc.h
- set_pbc()
: pbc.cpp
- set_pbc_dd()
: pbc.cpp
- set_pbc_simd()
: pbc-simd.cpp
, pbc-simd.h
- set_pos_method_flags()
: sm_position.cpp
- set_poscalc_maxindex()
: poscalc.cpp
- set_poscoll_pos()
: sm_position.cpp
- set_refpos_type()
: parsetree.cpp
- set_state_entries()
: mdrun.h
- set_tric_dir()
: box.cpp
- set_zones_ncg_home()
: partition.cpp
- set_zones_size()
: partition.cpp
- setDynamicPairlistPruningParameters()
: nbnxn_tuning.cpp
- setPrevStepPullComFromState()
: pull_internal.h
- setRandomBsWeights()
: gmx_wham.cpp
- setup_acc_wham()
: gmx_wham.cpp
- setup_base()
: poscalc.cpp
- setup_bonded_threading()
: manage-threading.cpp
, manage-threading.h
- setup_coordinate_communication()
: pme.cpp
- setup_dd_communication()
: partition.cpp
- setup_memory_pooling()
: compiler.cpp
- setup_specat_communication()
: domdec_specatomcomm.cpp
, domdec_specatomcomm.h
- setup_tab()
: gmx_wham.cpp
- setupDynamicPairlistPruning()
: nbnxn_tuning.h
, nbnxn_tuning.cpp
- sffn2effn()
: expfit.h
, expfit.cpp
- shift_positions()
: imd.cpp
- should_merge()
: poscalc.cpp
- sizeof_gpu_dev_info()
: gpu_utils.h
, gpu_utils_ocl.cpp
- smoothIact()
: gmx_wham.cpp
- snew_bc()
: broadcaststructs.h
- sortMoleculesIntoCompartments()
: swapcoords.cpp
- sp_header()
: minimize.cpp
- sph_distc()
: sm_insolidangle.cpp
- ssaupd()
: gmx_arpack.h
- sseupd()
: gmx_arpack.h
- startGpuProfiler()
: gpu_utils.h
- state_change_natoms()
: state.h
- stopGpuProfiler()
: gpu_utils.h
- store_param_val()
: compiler.cpp
- store_surface_point()
: sm_insolidangle.cpp
- str_to_int64_t()
: cstringutil.h
- strip_comment()
: cstringutil.h
- sum_forces()
: pme-gpu.cpp
- supportsDynamicPairlistGenerationInterval()
: nbnxn_tuning.cpp
- swap_em_state()
: minimize.cpp
- swap_header()
: imd.cpp
- switch_to_stage1()
: pme-load-balancing.cpp
- symmetrizeProfile()
: gmx_wham.cpp
- sync_ocl_event()
: nbnxn_ocl.cpp