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- f -
f() :
gmx::SelectionPosition
,
gmx::TrajectoryFrame
f_thread_t() :
f_thread_t
family() :
gmx::CpuInfo
feature() :
gmx::CpuInfo
featureSet() :
gmx::CpuInfo
featureString() :
gmx::CpuInfo
fepBits() :
Nbnxm::Grid
fepDimParams() :
gmx::DimParams
fepLambdaDimParams() :
gmx::DimParams
fepLambdaState() :
gmx::Awh
fepLists() :
PairlistSet
fetchNextEvent() :
GpuRegionTimerWrapper< GpuRegionTimerImpl >
,
GpuRegionTimerImpl
fileExists() :
gmx::IFileInputRedirector
,
gmx::test::TestFileInputRedirector
,
gmx::anonymous_namespace{fileredirector.cpp}::DefaultInputRedirector
FileIOError() :
gmx::FileIOError
FileIOXdrSerializer() :
gmx::FileIOXdrSerializer
fileManager() :
gmx::test::CommandLineTestBase
FileNameOption() :
gmx::FileNameOption
FileNameOptionInfo() :
gmx::FileNameOptionInfo
FileNameOptionStorage() :
gmx::FileNameOptionStorage
filenmToOptions() :
gmx::anonymous_namespace{pargs.cpp}::OptionsAdapter
filetype() :
gmx::FileNameOption
FileTypeHandler() :
gmx::anonymous_namespace{filenameoption.cpp}::FileTypeHandler
fileTypes() :
gmx::FileNameOptionInfo
,
gmx::FileNameOptionStorage
fill() :
ChainIdFiller
fillFromInputFile() :
gmx::TopologyInformation
fillNameIfMissing() :
gmx::SelectionTreeElement
FilteringExactTextMatch() :
gmx::test::FilteringExactTextMatch
finalize() :
gmx::MimicCommunicator
finalizeKineticContributions() :
ForeignLambdaTerms
finalizePotentialContributions() :
ForeignLambdaTerms
finalizeSignals() :
gmx::SimulationSignaller
find() :
gmx_ga2la_t
,
gmx::HashedMap< T >
,
gmx::EnergyFrame
findBin() :
gmx::AnalysisHistogramSettings
findEntry() :
gmx::test::TestReferenceChecker::Impl
findEntryByName() :
StringTableBuilder
findFile() :
gmx::DataFileFinder
findHome() :
gmx_ga2la_t
findModuleByName() :
gmx::CommandLineModuleManager::Impl
findNextLine() :
gmx::TextLineWrapper
findNextPair() :
gmx::AnalysisNeighborhoodPairSearch
findOption() :
gmx::internal::OptionSectionImpl
,
gmx::OptionsAssigner::Impl
findOrCreateEntry() :
gmx::test::TestReferenceChecker::Impl
findSection() :
gmx::internal::OptionSectionImpl
findSubTopic() :
gmx::anonymous_namespace{cmdlinehelpmodule.cpp}::CommandsHelpTopic
,
gmx::anonymous_namespace{cmdlinehelpmodule.cpp}::ModuleHelpTopic
,
gmx::AbstractSimpleHelpTopic
,
gmx::AbstractCompositeHelpTopic
,
gmx::IHelpTopic
findSymbol() :
gmx::SelectionParserSymbolTable
finish() :
gmx::Options
,
gmx::internal::OptionSectionImpl
,
gmx::OptionsAssigner
,
gmx::anonymous_namespace{analysismodule.cpp}::TrajectoryAnalysisModuleDataBasic
,
gmx::TrajectoryAnalysisModuleData
,
gmx::analysismodules::anonymous_namespace{pairdist.cpp}::PairDistanceModuleData
,
gmx::analysismodules::anonymous_namespace{rdf.cpp}::RdfModuleData
,
gmx::analysismodules::anonymous_namespace{sasa.cpp}::SasaModuleData
,
gmx::AnalysisDataFrameAverager
,
gmx::anonymous_namespace{cmdlinehelpwriter.cpp}::SynopsisFormatter
,
gmx::AbstractOptionStorage
finish_update() :
gmx::Update
finishAnalysis() :
gmx::TrajectoryAnalysisModule
,
gmx::analysismodules::anonymous_namespace{freevolume.cpp}::FreeVolume
,
gmx::analysismodules::anonymous_namespace{pairdist.cpp}::PairDistance
,
gmx::analysismodules::anonymous_namespace{rdf.cpp}::Rdf
,
gmx::analysismodules::anonymous_namespace{sasa.cpp}::Sasa
,
AnalysisTemplate
finishContext() :
gmx::MessageStringCollector
finishData() :
gmx::AnalysisData
,
gmx::AnalysisDataHandle
finishDataHandles() :
gmx::TrajectoryAnalysisModuleData
finishDataStorage() :
gmx::AnalysisDataStorage
finishFrame() :
gmx::AnalysisDataHandle
,
gmx::internal::AnalysisDataStorageImpl
,
gmx::internal::AnalysisDataStorageFrameData
,
gmx::AnalysisDataStorageFrame
,
gmx::AnalysisDataStorage
finishFrames() :
gmx::TrajectoryAnalysisModule
finishFrameSerial() :
gmx::AnalysisData
,
gmx::internal::AnalysisDataStorageImpl
,
gmx::AnalysisDataStorage
,
gmx::TrajectoryAnalysisModule
finishModuleExport() :
gmx::anonymous_namespace{cmdlinehelpmodule.cpp}::IHelpExport
,
gmx::anonymous_namespace{cmdlinehelpmodule.cpp}::HelpExportReStructuredText
,
gmx::anonymous_namespace{cmdlinehelpmodule.cpp}::HelpExportCompletion
finishModuleGroupExport() :
gmx::anonymous_namespace{cmdlinehelpmodule.cpp}::IHelpExport
,
gmx::anonymous_namespace{cmdlinehelpmodule.cpp}::HelpExportReStructuredText
,
gmx::anonymous_namespace{cmdlinehelpmodule.cpp}::HelpExportCompletion
finishOption() :
gmx::OptionsAssigner
finishOptions() :
gmx::CommandLineCommonOptionsHolder
finishOutput() :
gmx::DensityFittingOutputProvider
,
gmx::anonymous_namespace{electricfield.cpp}::ElectricField
,
gmx::IMDOutputProvider
finishPointSet() :
gmx::AnalysisDataHandle
,
gmx::AnalysisDataStorageFrame
finishReferenceFrame() :
gmx::test::MockAnalysisDataModule::Impl
finishReferenceFrameSerial() :
gmx::test::MockAnalysisDataModule::Impl
finishSection() :
gmx::anonymous_namespace{cmdlinehelpwriter.cpp}::OptionsListFormatter
,
gmx::IOptionSectionStorage
,
gmx::OptionsAssigner
,
gmx::RepeatingOptionSectionStorage< T >
finishSet() :
gmx::AbstractOptionStorage
firstAtomInColumn() :
Nbnxm::Grid
firstCellInColumn() :
Nbnxm::Grid
firstColumn() :
gmx::AnalysisDataPointSetRef
,
gmx::test::AnalysisDataTestInputPointSet
firstEdge() :
gmx::AnalysisHistogramSettings
firstLine() :
gmx::TextTableFormatter::Impl::ColumnData
firstLineIndent() :
gmx::RstParagraphIterator
,
gmx::TextLineWrapperSettings
firstStoredIndex() :
gmx::internal::AnalysisDataStorageImpl
firstUnnotifiedIndex() :
gmx::internal::AnalysisDataStorageImpl
flags() :
gmx::AnalysisDataAverageModule
,
gmx::AnalysisDataFrameAverageModule
,
gmx::AnalysisDataDisplacementModule
,
gmx::internal::BasicAverageHistogramModule
,
gmx::AnalysisDataSimpleHistogramModule
,
gmx::AnalysisDataWeightedHistogramModule
,
gmx::AnalysisDataBinAverageModule
,
gmx::AnalysisDataLifetimeModule
,
gmx::AbstractPlotModule
,
gmx::TrajectoryAnalysisSettings
,
gmx::analysismodules::anonymous_namespace{select.cpp}::IndexFileWriterModule
,
gmx::IAnalysisDataModule
,
gmx::AnalysisDataModuleSerial
,
gmx::AnalysisDataModuleParallel
,
gmx::AnalysisDataProxy
FlagsTemplate() :
gmx::FlagsTemplate< FlagType >
FloatingPointDifference() :
gmx::test::FloatingPointDifference
FloatingPointTolerance() :
gmx::test::FloatingPointTolerance
FloatOption() :
gmx::FloatOption
FloatOptionInfo() :
gmx::FloatOptionInfo
FloatOptionStorage() :
gmx::FloatOptionStorage
FloatTypeMatcher() :
gmx::test::FloatTypeMatcher< FloatType >
force() :
gmx::ForceWithShiftForces
,
gmx::ForceBuffersView
,
gmx::ForceWithShiftForces
forceBufferForDirectVirialContributions() :
ForceHelperBuffers
ForceBuffers() :
gmx::ForceBuffers
ForceBuffersView() :
gmx::ForceBuffersView
forceCorrelationGrid() :
gmx::Bias
ForceElement() :
gmx::ForceElement
ForceHelperBuffers() :
ForceHelperBuffers
forceMtsCombined() :
gmx::ForceBuffersView
forceMtsCombinedWithPadding() :
gmx::ForceBuffersView
ForceOutputs() :
gmx::ForceOutputs
forceParam() :
InteractionOfType
ForceProviderInput() :
gmx::ForceProviderInput
ForceProviderOutput() :
gmx::ForceProviderOutput
forces() :
gmx::Selection
forcesView() :
gmx::StatePropagatorData
forceVirial() :
gmx::EnergyData
forceWithPadding() :
gmx::ForceBuffersView
forceWithShiftForces() :
gmx::ForceOutputs
ForceWithShiftForces() :
gmx::ForceWithShiftForces
ForceWithVirial() :
gmx::ForceWithVirial
forceWithVirial() :
gmx::ForceOutputs
ForeignLambdaTerms() :
ForeignLambdaTerms
formatBugs() :
gmx::CommandLineHelpWriter::Impl
formatDescription() :
gmx::OptionInfo
formatExtraDescription() :
gmx::AbstractOptionStorage
,
gmx::EnumOptionStorage
,
gmx::FileNameOptionStorage
,
gmx::StringOptionStorage
formatLine() :
gmx::TextLineWrapper
formatOption() :
gmx::anonymous_namespace{cmdlinehelpwriter.cpp}::SynopsisFormatter
,
gmx::anonymous_namespace{cmdlinehelpwriter.cpp}::OptionsListFormatter
,
gmx::anonymous_namespace{cmdlinehelpwriter.cpp}::IOptionsFormatter
formatRow() :
gmx::TextTableFormatter
formatSelected() :
gmx::anonymous_namespace{cmdlinehelpwriter.cpp}::OptionsFilter
formatSingleValue() :
gmx::DoubleOptionStorage
,
anonymous_namespace{abstractoptionstorage.cpp}::MockOptionStorage
,
gmx::StringOptionStorage
,
gmx::EnumOptionStorage
,
gmx::BooleanOptionStorage
,
gmx::IntegerOptionStorage
,
gmx::Int64OptionStorage
,
gmx::FloatOptionStorage
,
gmx::OptionStorageTemplate< T >
,
gmx::SelectionOptionStorage
,
gmx::FileNameOptionStorage
frame() :
gmx::TrajectoryAnalysisRunnerCommon
,
gmx::test::SetStartTimeTest
,
gmx::test::SetBothTimeTest
,
gmx::test::EnergyFrameReader
,
gmx::test::TrajectoryFrameReader
,
gmx::test::AnalysisDataTestInput
,
gmx::test::SetTimeStepTest
frameCount() :
gmx::test::AnalysisDataTestInput
,
gmx::AnalysisData
,
gmx::AnalysisDataProxy
,
gmx::AnalysisDataStorage
,
gmx::AbstractAnalysisData
,
gmx::AbstractAnalysisArrayData
,
gmx::AnalysisDataFrameAverageModule
,
gmx::AnalysisDataWeightedHistogramModule
,
gmx::AnalysisDataFrameLocalData< ValueType >
,
gmx::AnalysisDataSimpleHistogramModule
frameData() :
gmx::AnalysisDataFrameLocalData< ValueType >
frameDataSet() :
gmx::AnalysisDataFrameLocalData< ValueType >
frameFinished() :
gmx::analysismodules::anonymous_namespace{select.cpp}::IndexFileWriterModule
,
gmx::AbstractPlotModule
,
gmx::AnalysisDataModuleSerial
,
gmx::IAnalysisDataModule
,
gmx::AnalysisDataSimpleHistogramModule
,
gmx::internal::BasicAverageHistogramModule
,
gmx::AnalysisDataAverageModule
,
gmx::AnalysisDataWeightedHistogramModule
,
gmx::AnalysisDataModuleParallel
,
gmx::AnalysisDataProxy
,
gmx::AnalysisDataDisplacementModule
,
gmx::AnalysisDataBinAverageModule
,
gmx::AnalysisDataFrameAverageModule
,
gmx::AnalysisDataLifetimeModule
frameFinishedSerial() :
gmx::AnalysisDataProxy
,
gmx::AnalysisDataModuleParallel
,
gmx::AnalysisDataWeightedHistogramModule
,
gmx::IAnalysisDataModule
,
gmx::AnalysisDataSimpleHistogramModule
frameIndex() :
gmx::internal::AnalysisDataStorageFrameData
,
gmx::AnalysisDataPointSetRef
,
gmx::AnalysisDataFrameRef
frameName() :
gmx::EnergyFrame
,
gmx::TrajectoryFrame
FramePairManager() :
gmx::test::FramePairManager< FrameReader >
frameReference() :
gmx::internal::AnalysisDataStorageFrameData
frameStarted() :
gmx::AnalysisDataWeightedHistogramModule
,
gmx::AnalysisDataSimpleHistogramModule
,
gmx::internal::BasicAverageHistogramModule
,
gmx::AnalysisDataModuleParallel
,
gmx::AnalysisDataProxy
,
gmx::AnalysisDataFrameAverageModule
,
gmx::AnalysisDataAverageModule
,
gmx::AnalysisDataBinAverageModule
,
gmx::AnalysisDataLifetimeModule
,
gmx::AnalysisDataDisplacementModule
,
gmx::AnalysisDataModuleSerial
,
gmx::analysismodules::anonymous_namespace{select.cpp}::IndexFileWriterModule
,
gmx::IAnalysisDataModule
,
gmx::AbstractPlotModule
free() :
gmx::AlignedAllocationPolicy
,
gmx::HostAllocationPolicy
,
gmx::PageAlignedAllocationPolicy
freeCompilerData() :
gmx::SelectionTreeElement
freeEnergy() :
gmx::PointState
FreeEnergyPerturbationData() :
gmx::FreeEnergyPerturbationData
freeExpressionData() :
gmx::SelectionTreeElement
freeValues() :
gmx::SelectionTreeElement
frflags() :
gmx::TrajectoryAnalysisSettings
frictionOutputFile() :
BiasOutputSetup
from() :
gmx::KeyValueTreeTransformRuleBuilder
front() :
gmx::internal::SimdArrayRef< T >
,
gmx::ArrayRef< typename >
,
gmx::ListOfLists< typename >
,
gmx::FixedCapacityVector< T, capacity >
fullBinaryPath() :
gmx::test::anonymous_namespace{testinit.cpp}::TestProgramContext
,
gmx::CommandLineProgramContext
,
gmx::anonymous_namespace{programcontext.cpp}::DefaultProgramContext
,
gmx::IProgramContext
fullCleanUp() :
MoleculeInformation
fullRange() :
gmx::RangePartitioning
functionType() :
VsiteAtomMapping
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