- r -
- Range()
: gmx::Range< typename >
- range()
: gmx::AnalysisHistogramSettingsInitializer
- RangeError()
: gmx::RangeError
- rank()
: gmx::extents< StaticExtents >
, gmx::basic_mdspan< ElementType, Extents, LayoutPolicy, AccessorPolicy >
, gmx::detail::extents_analyse< R, E0, StaticExtents...>
, gmx::detail::extents_analyse< R, dynamic_extent, StaticExtents...>
, gmx::detail::extents_analyse< 0 >
- rank_dynamic()
: gmx::detail::extents_analyse< R, E0, StaticExtents...>
, gmx::detail::extents_analyse< R, dynamic_extent, StaticExtents...>
, gmx::detail::extents_analyse< 0 >
, gmx::extents< StaticExtents >
, gmx::basic_mdspan< ElementType, Extents, LayoutPolicy, AccessorPolicy >
- rawIndex()
: gmx::RangePartitioning
- rbegin()
: gmx::EnumerationArray< EnumType, DataType, ArraySize >
, gmx::FixedCapacityVector< typename, size_t >
, gmx::ArrayRef< typename >
- readAll()
: gmx::TextReader
- readCheckpointToTrxFrame()
: gmx::ModularSimulator
- readDouble()
: gmx::test::TestReferenceChecker
- readFileToString()
: gmx::TextReader
- readFloat()
: gmx::test::TestReferenceChecker
- reading()
: gmx::ISerializer
- readInt32()
: gmx::test::TestReferenceChecker
- readInt64()
: gmx::test::TestReferenceChecker
- readInteger()
: gmx::test::TestReferenceChecker
- readLine()
: gmx::StringInputStream
, gmx::TextReader
, gmx::TextInputStream
, gmx::StandardInputStream
, gmx::TextInputFile
- readString()
: gmx::test::TestReferenceChecker
- readUChar()
: gmx::test::TestReferenceChecker
- readWriteFlags()
: gmx::FileNameOption
- reasonsWhyDisabled()
: gmx::SeparatePmeRanksPermitted
- receiveForceFromPme()
: gmx::PmePpCommGpu
- redirectStringToStdin()
: gmx::test::StdioTestHelper
- reduceNumBlocks()
: gmx::RangePartitioning
- reductionComplete()
: gmx::ObservablesReducer
- referenceCoordinates()
: t_oriresdata
- refId()
: gmx::SelectionPosition
- refIds()
: gmx::Selection
- refIndex()
: gmx::AnalysisNeighborhoodPair
- registerAnalysisDataset()
: gmx::TrajectoryAnalysisModule
- registerAwhWithPull()
: gmx::Awh
- registerBasicDataset()
: gmx::TrajectoryAnalysisModule
- registerModule()
: gmx::CommandLineModuleManager
, gmx::TrajectoryAnalysisCommandLineRunner
- registerModuleDirect()
: gmx::ICommandLineOptionsModule
- registerModuleFactory()
: gmx::ICommandLineOptionsModule
- registerOption()
: gmx::SelectionOptionManager
- registerStopCondition()
: gmx::StopHandlerBuilder
- registerSubTopic()
: gmx::AbstractCompositeHelpTopic
- reinit()
: gmx::PmePpCommGpu
- reinitHalo()
: gmx::GpuHaloExchange
- relativeToleranceAsFloatingPoint()
: gmx::test::FloatingPointTolerance
- relativeToleranceAsPrecisionDependentFloatingPoint()
: gmx::test::FloatingPointTolerance
- relativeToleranceAsPrecisionDependentUlp()
: gmx::test::FloatingPointTolerance
- relativeToleranceAsUlp()
: gmx::test::FloatingPointTolerance
- rend()
: gmx::FixedCapacityVector< typename, size_t >
, gmx::ArrayRef< typename >
, gmx::FixedCapacityVector< typename, size_t >
- renumberTypes()
: PreprocessingAtomTypes
- reopenRegionCpu()
: DDBalanceRegionHandler
- RepeatingOptionSection()
: gmx::RepeatingOptionSection< T >
- RepeatingOptionSectionHandle()
: gmx::RepeatingOptionSectionHandle< T >
- reportGpuUsage()
: gmx::GpuTaskAssignments
- representativeItem()
: gmx::UnionFinder
- representativeValue()
: gmx::MappedUnionFinder
- requestOptionDelayedParsing()
: gmx::SelectionOptionManager
- requestStorage()
: gmx::AbstractAnalysisData
, gmx::AnalysisDataStorage
- requestStorageInternal()
: gmx::AbstractAnalysisData
- required()
: gmx::OptionTemplate< T, U >
- required_span_size()
: gmx::layout_right::mapping< Extents >
- requiredTopologyProperties()
: gmx::SelectionCollection
- requiresIndexGroups()
: gmx::SelectionCollection
- resampleDoubleBinWidth()
: gmx::AbstractAverageHistogram
- reserveChargeA()
: gmx::MDAtoms
- reserveChargeB()
: gmx::MDAtoms
- reserveWithPadding()
: gmx::PaddedVector< T, Allocator >
- reset()
: GpuEventSynchronizer
, GpuRegionTimerWrapper< GpuRegionTimerImpl >
, gmx::ExponentialDistribution< RealType >
, gmx::GammaDistribution< RealType >
, gmx::NormalDistribution< RealType >
, gmx::UniformRealDistribution< RealType >
, gmx::UniformIntDistribution< IntType >
, gmx::AnalysisNeighborhoodSearch
, gmx::TabulatedNormalDistribution< RealType, tableBits >
, GpuRegionTimerImpl
- resetCounters()
: gmx::ResetHandler
- ResetHandler()
: gmx::ResetHandler
- resetIfFullyConsumed()
: GpuEventSynchronizer
- residueName()
: AtomProxy
- residueNumber()
: AtomProxy
- resize()
: ForceHelperBuffers
, gmx::MultiDimArray< TContainer, Extents, LayoutPolicy >
, gmx::ForceBuffers
- resizeChargeA()
: gmx::MDAtoms
- resizeChargeB()
: gmx::MDAtoms
- resizeWithPadding()
: gmx::PaddedVector< T, Allocator >
- restart()
: gmx::ThreeFry2x64General< rounds, internalCounterBits >
- restoreStateFromHistory()
: gmx::Awh
- RestraintManager()
: gmx::RestraintManager
- RestraintMDModule()
: gmx::RestraintMDModule
- rmsd()
: gmx::Constraints
- rootChecker()
: gmx::test::CommandLineTestBase
, gmx::test::TestReferenceData
- rootObject()
: gmx::KeyValueTreeBuilder
- rootSection()
: gmx::Options
- roundRange()
: gmx::AnalysisHistogramSettingsInitializer
- rowCount()
: gmx::AbstractAnalysisArrayData
- rules()
: gmx::KeyValueTreeTransformRulesScoped
- run()
: gmx::ICommandLineModule
, gmx::CommandLineModuleManager
, gmx::ICommandLineOptionsModule
, gmx::ModularSimulator
- runAsMain()
: gmx::TrajectoryAnalysisCommandLineRunner
, gmx::ICommandLineOptionsModule
, gmx::TrajectoryAnalysisCommandLineRunner
- runAsMainCMain()
: gmx::CommandLineModuleManager
- runAsMainCMainWithSettings()
: gmx::CommandLineModuleManager
- runAsMainSingleModule()
: gmx::CommandLineModuleManager
- runModuleDirect()
: gmx::test::CommandLineTestHelper
- runModuleFactory()
: gmx::test::CommandLineTestHelper
- runTest()
: gmx::test::ModuleTest
- rvec_array()
: gmx::PaddedVector< T, Allocator >