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2022.2
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X
A
DomdecOptions
(
gmx
)
PmeForceSenderGpu::Impl
(
gmx
)
NelderMeadSimplex
(
gmx
)
ShakeTest
(
gmx::anonymous_namespace{shake.cpp}
)
DoubleOption
(
gmx
)
PmeCoordinateReceiverGpu::Impl
(
gmx
)
no_delete
(
gmx
)
GaussianSpreadKernelParameters::Shape
(
gmx
)
AbstractAnalysisArrayData
(
gmx
)
DoubleOptionInfo
(
gmx
)
OptionsAssigner::Impl
(
gmx
)
BuildMDModulesNotifier<>::NoCallParameter
(
gmx
)
HelpWriterContext::Impl::SharedState
(
gmx
)
AbstractAnalysisData
(
gmx
)
DoubleOptionStorage
(
gmx
)
ObservablesReducerBuilder::Impl
(
gmx
)
NoContentsMatch
(
gmx::test
)
SignallerBuilder
(
gmx
)
AbstractAverageHistogram
(
gmx
)
E
ObservablesReducer::Impl
(
gmx
)
nonbonded_verlet_t
SignalTest
(
gmx::test
)
AbstractCompositeHelpTopic
(
gmx
)
MrcDensityMapOfFloatWriter::Impl
(
gmx
)
NonbondedBenchmarkInfo
(
gmx
)
Simd4DBool
(
gmx
)
AbstractOption
(
gmx
)
ekinstate_t
MrcDensityMapOfFloatReader::Impl
(
gmx
)
NoOptionalOutput
(
gmx::test
)
Simd4Double
(
gmx
)
AbstractOptionSection
(
gmx
)
ElectricField
(
gmx::anonymous_namespace{electricfield.cpp}
)
LocalTopologyChecker::Impl
(
gmx
)
NormalDistribution
(
gmx
)
Simd4FBool
(
gmx
)
AbstractOptionSectionHandle
(
gmx
)
ElectricFieldDimension
(
gmx::anonymous_namespace{electricfield.cpp}
)
LocalAtomSetManager::Impl
(
gmx
)
NormalModesTest
(
gmx::test::anonymous_namespace{normalmodes.cpp}
)
Simd4Float
(
gmx
)
AbstractOptionStorage
(
gmx
)
StatePropagatorData::Element
(
gmx
)
ListedForcesGpu::Impl
(
gmx
)
NoseHooverChainsData
(
gmx
)
Simd4Test
(
gmx::test
)
AbstractPlotModule
(
gmx
)
FreeEnergyPerturbationData::Element
(
gmx
)
ImdSession::Impl
(
gmx
)
NoseHooverChainsElement
(
gmx
)
SimdArrayRef
(
gmx::internal
)
AbstractSimpleHelpTopic
(
gmx
)
EnergyData::Element
(
gmx
)
HelpWriterContext::Impl
(
gmx
)
NoseHooverGroup
(
gmx
)
SimdBaseTest
(
gmx::test
)
AbstractTrajectoryAnalysisModuleTestFixture
(
gmx::test
)
ElementNotFoundError
(
gmx
)
HelpManager::Impl
(
gmx
)
NoseHooverTemperatureCoupling
(
gmx
)
SimdDataTypes
accessor_basic
(
gmx
)
em_state
HelpLinks::Impl
(
gmx
)
not_null
(
gmx::compat
)
SimdDBool
(
gmx
)
AffineTransformation
(
gmx
)
EnergyCalculationFrequencyErrors
(
gmx
)
GpuHaloExchange::Impl
(
gmx
)
NoTextMatch
(
gmx::test
)
SimdDIBool
(
gmx
)
KeyValueTreeTransformRuleBuilder::AfterFrom
(
gmx
)
EnergyComparison
(
gmx::test
)
Gpu3dFft::ImplSyclRocfft::Impl
(
gmx
)
NotImplementedError
(
gmx
)
SimdDInt32
(
gmx
)
AlignedAllocationPolicy
(
gmx
)
EnergyData
(
gmx
)
Gpu3dFft::Impl
(
gmx
)
HardwareTopology::Numa
(
gmx
)
SimdDInt32Tag
(
gmx
)
AlignedArray< double, N >
(
gmx
)
EnergyDriftTracker
(
gmx
)
GaussTransform3D::Impl
(
gmx
)
HardwareTopology::NumaNode
(
gmx
)
SimdDouble
(
gmx
)
AlignedArray< float, N >
(
gmx
)
EnergyEvaluator
(
anonymous_namespace{minimize.cpp}
)
FileNameOptionManager::Impl
(
gmx
)
NumericalSplineTableInput
(
gmx
)
SimdDoubleTag
(
gmx
)
Allocator
(
gmx
)
EnergyFrame
(
gmx
)
DomainDecompositionBuilder::Impl
(
gmx
)
NumPmeDomains
SimdFBool
(
gmx
)
AllocatorTest
(
gmx::test
)
EnergyFrameReader
(
gmx::test
)
DeviceStreamManager::Impl
(
gmx
)
NumRanksPerSimulation
(
gmx::test
)
SimdFIBool
(
gmx
)
AllowAnyRankCount
(
gmx::test
)
EnergyFunctionProperties
(
Nbnxm
)
DensityFittingForce::Impl
(
gmx
)
O
SimdFInt32
(
gmx
)
AllVsiteBondedInteractions
EnergyMinimizationTest
(
gmx::test::anonymous_namespace{minimize.cpp}
)
CommandLineParser::Impl
(
gmx
)
SimdFInt32Tag
(
gmx
)
AnalysisArrayData
(
gmx
)
EnergyOutputTest
(
gmx::test::anonymous_namespace{energyoutput.cpp}
)
CommandLineModuleManager::Impl
(
gmx
)
ObservablesHistory
SimdFloat
(
gmx
)
AnalysisData
(
gmx
)
EnergyOutputTestParameters
(
gmx::test::anonymous_namespace{energyoutput.cpp}
)
CommandLineHelpWriter::Impl
(
gmx
)
ObservablesReducer
(
gmx
)
SimdFloatingpointUtilTest
(
gmx::test::anonymous_namespace{simd_floatingpoint_util.cpp}
)
AnalysisDataAverageModule
(
gmx
)
EnergySignaller
(
gmx
)
CommandLineHelpContext::Impl
(
gmx
)
ObservablesReducerBuilder
(
gmx
)
SimdFloatTag
(
gmx
)
AnalysisDataBinAverageModule
(
gmx
)
gmx_ga2la_t::Entry
AnalysisDataWeightedHistogramModule::Impl
(
gmx
)
ObservablesReducerIntegrationTest
(
gmx::test::anonymous_namespace{observablesreducer.cpp}
)
nbnxn_atomdata_t::SimdMasks
AnalysisDataDisplacementModule
(
gmx
)
EnumerationArray
(
gmx
)
AnalysisDataSimpleHistogramModule::Impl
(
gmx
)
ObsoleteToolModule
(
anonymous_namespace{legacymodules.cpp}
)
SimdSetZeroProxy
(
gmx
)
AnalysisDataFrameAverageModule
(
gmx
)
EnumerationIterator
(
gmx
)
AnalysisDataModuleManager::Impl
(
gmx
)
Offset
(
gmx
)
SimdTest
(
gmx::test
)
AnalysisDataFrameAverager
(
gmx
)
EnumerationWrapper
(
gmx
)
AnalysisDataLifetimeModule::Impl
(
gmx
)
omp_module_nthreads_t
SimdTraits
(
gmx::internal
)
AnalysisDataFrameHeader
(
gmx
)
EnumIndexStore
(
gmx::internal
)
AnalysisDataDisplacementModule::Impl
(
gmx
)
OpenClTraits
(
gmx
)
SimpleHelpTopic
(
gmx
)
AnalysisDataFrameLocalData
(
gmx
)
EnumOption
(
gmx
)
AnalysisData::Impl
(
gmx
)
OpenClTraits< cl_command_queue >
(
gmx
)
SimpleMdrunTest
(
gmx::test::anonymous_namespace{simple_mdrun.cpp}
)
AnalysisDataFrameLocalDataHandle
(
gmx
)
EnumOptionInfo
(
gmx
)
AbstractCompositeHelpTopic::Impl
(
gmx
)
OpenClTraits< cl_context >
(
gmx
)
SimulationAlgorithmSetupError
(
gmx
)
AnalysisDataFrameLocalDataSetHandle
(
gmx
)
EnumOptionStorage
(
gmx
)
AbstractAnalysisData::Impl
(
gmx
)
OpenClTraits< cl_kernel >
(
gmx
)
SimulationContext
(
gmx
)
AnalysisDataFrameRef
(
gmx
)
EqualCaseInsensitive
(
gmx
)
AtomProperties::Impl
OpenClTraits< cl_program >
(
gmx
)
SimulationGroups
AnalysisDataHandle
(
gmx
)
ErrorMessage
(
gmx::anonymous_namespace{exceptions.cpp}
)
Gpu3dFft::ImplCuFft
(
gmx
)
OpenClTraitsBase
(
gmx
)
SimulationInputHandle
(
gmx
)
AnalysisDataHandleImpl
(
gmx::internal
)
EwaldBoxZScaler
Gpu3dFft::ImplOcl
(
gmx
)
OptimisationResult
(
gmx
)
SimulationInputHandleImplDeleter
(
gmx::detail
)
AnalysisDataLifetimeModule
(
gmx
)
EwaldSurfaceTermTest
(
gmx::test::anonymous_namespace{ewaldsurfaceterm.cpp}
)
Gpu3dFft::ImplSycl
(
gmx
)
OptionInfo
(
gmx
)
SimulationInstabilityError
(
gmx
)
AnalysisDataModuleManager
(
gmx
)
ExactTextMatch
(
gmx::test
)
Gpu3dFft::ImplSyclMkl
(
gmx
)
OptionManagerContainer
(
gmx
)
SimulationRunner
(
gmx::test
)
AnalysisDataModuleParallel
(
gmx
)
ExceptionInfo
(
gmx
)
Gpu3dFft::ImplSyclRocfft
(
gmx
)
Options
(
gmx
)
SimulationSignal
(
gmx
)
AnalysisDataModuleSerial
(
gmx
)
ExceptionInitializer
(
gmx
)
InconsistentInputError
(
gmx
)
OptionsAdapter
(
gmx::anonymous_namespace{pargs.cpp}
)
SimulationSignaller
(
gmx
)
AnalysisDataParallelOptions
(
gmx
)
ExclusionBlock
(
gmx
)
IndexBlockTest
(
anonymous_namespace{indexutil.cpp}
)
OptionsAssigner
(
gmx
)
SimulationTimeStep
(
gmx
)
AnalysisDataPlotModule
(
gmx
)
ExpandedEnsembleElement
(
gmx
)
IndexFileWriterModule
(
gmx::analysismodules::anonymous_namespace{select.cpp}
)
OptionsBehaviorCollection
(
gmx
)
SimulationWorkload
(
gmx
)
AnalysisDataPlotSettings
(
gmx
)
ExponentialDistribution
(
gmx
)
IndexGroupsAndNames
(
gmx
)
OptionSection
(
gmx
)
SimulatorBuilder
(
gmx
)
AnalysisDataPointSetRef
(
gmx
)
ExponentialMovingAverage
(
gmx
)
INeighborSearchSignallerClient
(
gmx
)
OptionSectionHandle
(
gmx
)
SimulatorConfig
(
gmx
)
AnalysisDataProxy
(
gmx
)
ExponentialMovingAverageState
(
gmx
)
InitialConstraintsTest
(
gmx::test::anonymous_namespace{initialconstraints.cpp}
)
OptionSectionImpl
(
gmx::internal
)
SimulatorEnv
(
gmx
)
AnalysisDataSimpleHistogramModule
(
gmx
)
extents
(
gmx
)
InstallationPrefixInfo
(
gmx
)
OptionsFilter
(
gmx::anonymous_namespace{cmdlinehelpwriter.cpp}
)
SimulatorStateData
(
gmx
)
AnalysisDataStorage
(
gmx
)
extents_analyse< 0 >
(
gmx::detail
)
Int64Option
(
gmx
)
OptionsImpl
(
gmx::internal
)
SingleRankChecker
(
anonymous_namespace{resourcedivision.cpp}
)
AnalysisDataStorageFrame
(
gmx
)
extents_analyse< R, dynamic_extent, StaticExtents...>
(
gmx::detail
)
Int64OptionInfo
(
gmx
)
OptionsIterator
(
gmx
)
Site
(
gmx
)
AnalysisDataStorageFrameData
(
gmx::internal
)
extents_analyse< R, E0, StaticExtents...>
(
gmx::detail
)
Int64OptionStorage
(
gmx
)
OptionsListFormatter
(
gmx::anonymous_namespace{cmdlinehelpwriter.cpp}
)
SolveKernelParams
AnalysisDataStorageImpl
(
gmx::internal
)
ExtractClusterModuleTest
(
gmx::test::anonymous_namespace{extract_cluster.cpp}
)
IntegerBox
(
gmx
)
OptionsModifyingIterator
(
gmx
)
SolveTest
(
gmx::test::anonymous_namespace{pmesolvetest.cpp}
)
AnalysisDataTestFixture
(
gmx::test
)
F
IntegerOption
(
gmx
)
OptionsModifyingTypeVisitor
(
gmx
)
SolveTestBody
(
gmx::test::anonymous_namespace{pmesolvetest.cpp}
)
AnalysisDataTestInput
(
gmx::test
)
IntegerOptionInfo
(
gmx
)
OptionsModifyingVisitor
(
gmx
)
sort_along_vec_t
AnalysisDataTestInputFrame
(
gmx::test
)
DimParams::FepDimParams
(
gmx
)
IntegerOptionStorage
(
gmx
)
OptionStorageTemplate
(
gmx
)
spheresurfacebin
AnalysisDataTestInputPointSet
(
gmx::test
)
FepStateSetting
(
gmx
)
GpuTimers::Interaction
(
Nbnxm
)
OptionStorageTemplateSimple
(
gmx
)
SplineAndSpreadTest
(
gmx::test::anonymous_namespace{pmesplinespreadtest.cpp}
)
AnalysisDataValue
(
gmx
)
FileIOError
(
gmx
)
InteractionListHandle
OptionsTypeVisitor
(
gmx
)
SplineAndSpreadTestBody
(
gmx::test::anonymous_namespace{pmesplinespreadtest.cpp}
)
AnalysisDataVectorPlotModule
(
gmx
)
FileIOXdrSerializer
(
gmx
)
InteractionOfType
OptionsVisitor
(
gmx
)
SplineData
(
gmx::test::anonymous_namespace{pmegathertest.cpp}
)
AnalysisDataWeightedHistogramModule
(
gmx
)
FileNameOption
(
gmx
)
InteractionsOfType
OptionTemplate
(
gmx
)
SplineTableTest
(
gmx::test::anonymous_namespace{splinetable.cpp}
)
AnalysisHistogramSettings
(
gmx
)
FileNameOptionInfo
(
gmx
)
InteractiveMD
(
gmx
)
OptionValueConverterSimple
(
gmx
)
StandardInputStream
(
gmx
)
AnalysisHistogramSettingsInitializer
(
gmx
)
FileNameOptionManager
(
gmx
)
InteractiveMolecularDynamics
(
gmx
)
OptionValueStoreNull
(
gmx
)
StartingBehaviorHandler
(
gmx::anonymous_namespace{handlerestart.cpp}
)
AnalysisNeighborhood
(
gmx
)
FileNameOptionStorage
(
gmx
)
InteractiveTestHelper
(
gmx::test
)
OuterProductEvaluator
(
gmx
)
StatePropagatorData
(
gmx
)
AnalysisNeighborhoodPair
(
gmx
)
FileTypeHandler
(
gmx::anonymous_namespace{filenameoption.cpp}
)
InterdependentTask
(
gmx
)
OutputAdapterContainer
(
gmx
)
StaticAverageHistogram
(
gmx::anonymous_namespace{histogram.cpp}
)
AnalysisNeighborhoodPairSearch
(
gmx
)
FileTypeMapping
(
gmx::anonymous_namespace{filenameoption.cpp}
)
InternalError
(
gmx
)
OutputFile
StaticDataFrameHeaderChecker
(
gmx::test::anonymous_namespace{mock_datamodule.cpp}
)
AnalysisNeighborhoodPositions
(
gmx
)
FilteringExactTextMatch
(
gmx::test
)
InvalidInputError
(
gmx
)
OutputQuantities
(
gmx::test::anonymous_namespace{pairs.cpp}
)
StaticDataPointsChecker
(
gmx::test::anonymous_namespace{mock_datamodule.cpp}
)
AnalysisNeighborhoodSearch
(
gmx
)
FirstOrderPressureCoupling
(
gmx
)
IonSwapping
(
gmx
)
OutputQuantities
(
gmx::test::anonymous_namespace{nb_free_energy.cpp}
)
StaticDataPointsStorageChecker
(
gmx::test::anonymous_namespace{mock_datamodule.cpp}
)
AnalysisTemplate
FixedCapacityVector
(
gmx
)
IOptionManager
(
gmx
)
OutputQuantities
(
gmx::test::anonymous_namespace{bonded.cpp}
)
StaticLog2
(
gmx
)
AnalyticalSplineTableInput
(
gmx
)
FlagsTemplate
(
gmx
)
IOptionsBehavior
(
gmx
)
OutputRequirementOptionDirector
(
gmx
)
StaticLog2< 0 >
(
gmx
)
AndersenTemperatureCoupling
(
gmx
)
FlagTest
(
gmx::test
)
IOptionsContainer
(
gmx
)
OutputRequirements
(
gmx
)
StaticLog2< 1 >
(
gmx
)
AnglePositionIterator
(
gmx::analysismodules::anonymous_namespace{angle.cpp}
)
FloatingPointDifference
(
gmx::test
)
IOptionsContainerWithSections
(
gmx
)
OutputSelector
(
gmx
)
StdioTestHelper
(
gmx::test
)
Any
(
gmx
)
FloatingPointTolerance
(
gmx::test
)
IOptionSectionStorage
(
gmx
)
OutputSelectorDeathTest
(
gmx::test
)
StepWorkload
(
gmx
)
AnyOutputSupportedFiles
(
gmx::test
)
FloatOption
(
gmx
)
IOptionsFormatter
(
gmx::anonymous_namespace{cmdlinehelpwriter.cpp}
)
P
StopConditionSignal
(
gmx
)
ApicIdLayout
(
gmx::anonymous_namespace{cpuinfo.cpp}
)
FloatOptionInfo
(
gmx
)
IOptionValueStore
(
gmx
)
StopConditionTime
(
gmx
)
ApicInfo
(
gmx::anonymous_namespace{cpuinfo.cpp}
)
FloatOptionStorage
(
gmx
)
IOutputAdapter
(
gmx
)
HardwareTopology::Package
(
gmx
)
StopHandler
(
gmx
)
APIError
(
gmx
)
FloatTypeMatcher
(
gmx::test
)
IProgramContext
(
gmx
)
PaddedVector
(
gmx
)
StopHandlerBuilder
(
gmx
)
ArrayRef
(
gmx
)
ForceBuffers
(
gmx
)
IRestraintPotential
(
gmx
)
PaddedVectorTest
(
gmx::test
)
StringCompare
(
gmx
)
ArrayRefWithPadding
(
gmx
)
ForceBuffersView
(
gmx
)
ISerializer
(
gmx
)
PaddingTraits
(
gmx::detail
)
StringFormatter
(
gmx
)
Atom2VsiteBond
ForceElement
(
gmx
)
ISignaller
(
gmx
)
PageAlignedAllocationPolicy
(
gmx
)
StringInputStream
(
gmx
)
AtomData
(
gmx::test::anonymous_namespace{nb_free_energy.cpp}
)
ForceHelperBuffers
ISimulator
(
gmx
)
PairDistance
(
gmx::analysismodules::anonymous_namespace{pairdist.cpp}
)
StringKeywordMatchItem
(
anonymous_namespace{sm_keywords.cpp}
)
AtomDistribution
ForceOutputs
(
gmx
)
ISimulatorElement
(
gmx
)
PairDistanceModuleData
(
gmx::analysismodules::anonymous_namespace{pairdist.cpp}
)
StringOption
(
gmx
)
AtomIndex
(
gmx
)
ForceProviderInput
(
gmx
)
isIntegralConstant
(
gmx
)
PairlistParams
StringOptionInfo
(
gmx
)
AtomIndexExtremes
(
gmx
)
ForceProviderOutput
(
gmx
)
IsSerializableEnum
(
gmx
)
PairlistSet
StringOptionStorage
(
gmx
)
AtomIndexSet
ForceProviders
(
gmx
)
IsSerializableType
(
gmx
)
PairlistSets
StringOutputStream
(
gmx
)
AtomInfoWithinMoleculeBlock
(
gmx
)
ForceWithShiftForces
(
gmx
)
IsVectorOfSerializableType
(
gmx::test::anonymous_namespace{checkpointdata.cpp}
)
PairSearch
StringTable
AtomInMolblock
ForceWithVirial
(
gmx
)
ITemperatureCouplingImpl
(
gmx
)
PairsearchWork
StringTableBuilder
AtomIterator
ForeignLambdaTerms
TestValues::TestValueGenerator::Iterator
(
gmx::test::anonymous_namespace{checkpointdata.cpp}
)
ParallelConsistencyError
(
gmx
)
StringTableEntry
AtomPair
(
gmx
)
FramePairManager
(
gmx::test
)
Range::iterator
(
gmx
)
UniformRealDistribution::param_type
(
gmx
)
StringTestBase
(
gmx::test
)
AtomProperties
FreeEnergyDispatch
ITextBlockMatcher
(
gmx::test
)
UniformIntDistribution::param_type
(
gmx
)
StringToEnumValueConverter
(
gmx
)
AtomProperty
FreeEnergyParameterTest
(
gmx::test::anonymous_namespace{freeenergyparameters.cpp}
)
ITextBlockMatcherSettings
(
gmx::test
)
TabulatedNormalDistribution::param_type
(
gmx
)
Subscriber
(
gmx::test::anonymous_namespace{observablesreducer.cpp}
)
AtomProxy
FreeEnergyParameterTestParameters
(
gmx::test::anonymous_namespace{freeenergyparameters.cpp}
)
ITopologyHolderClient
(
gmx
)
NormalDistribution::param_type
(
gmx
)
ObservablesReducerBuilder::Impl::Subscription
(
gmx
)
AtomRange
FreeEnergyPerturbationData
(
gmx
)
ITopologyProvider
(
gmx
)
GammaDistribution::param_type
(
gmx
)
SuccessListener
(
gmx::test::anonymous_namespace{testinit.cpp}
)
AtomsAdjacencyListElement
(
gmx
)
FreeVolume
(
gmx::analysismodules::anonymous_namespace{freevolume.cpp}
)
ITrajectorySignallerClient
(
gmx
)
ExponentialDistribution::param_type
(
gmx
)
SurfaceAreaCalculator
(
gmx
)
Awh
(
gmx
)
functor_wrapper
(
gmx
)
ITrajectoryWriterClient
(
gmx
)
ParameterizedMdrunTestFixture
(
gmx::test
)
swap_compartment
AwhEnergyBlock
(
gmx
)
G
IWrapper
(
gmx::anonymous_namespace{helpwritercontext.cpp}
)
nbnxn_atomdata_t::Params
swap_group
AwhParams
(
gmx
)
K
ParrinelloRahmanBarostat
(
gmx
)
SwapCoordinates
(
gmx
)
AwhReader
GammaDistribution
(
gmx
)
PartialDeserializedTprFile
SynopsisFormatter
(
gmx::anonymous_namespace{cmdlinehelpwriter.cpp}
)
AwhTestParameters
(
gmx::test
)
GatherTest
(
gmx::test::anonymous_namespace{pmegathertest.cpp}
)
KernelBenchOptions
(
Nbnxm
)
partition
T
B
GatherTestBody
(
gmx::test::anonymous_namespace{pmegathertest.cpp}
)
KernelLaunchConfig
PbcAiuc
GaussianOn1DLattice
(
gmx
)
KeyValueTreeBuilder
(
gmx
)
PeriodicActionsTest
(
gmx::test
)
t_bb
BalanceRegion
GaussianSpreadKernelParameters
(
gmx
)
KeyValueTreeObjectArrayBuilder
(
gmx
)
PhysicalNodeCommunicator
(
gmx
)
t_compare_value
KeyValueTreeTransformRuleBuilder::Base
(
gmx
)
GaussTransform3D
(
gmx
)
KeyValueTreeObjectBuilder
(
gmx
)
PlanSetupData
(
gmx::anonymous_namespace{gpu_3dfft_sycl_rocfft.cpp}
)
t_compiler_data
BaseEntry
Grid::Geometry
(
Nbnxm
)
KeyValueTreePath
(
gmx
)
pme_setup_t
t_conect
(
gmx::analysismodules::anonymous_namespace{sasa.cpp}
)
basic_mdspan
(
gmx
)
GlobalCommandLineHelpContext
(
gmx
)
KeyValueTreeTransformRuleBuilder
(
gmx
)
PmeBSplineModuliTest
(
gmx::test::anonymous_namespace{pmebsplinetest.cpp}
)
t_coordselection
BasicAverageHistogramModule
(
gmx::internal
)
GlobalCommunicationHelper
(
gmx
)
KeyValueTreeTransformRulesScoped
(
gmx
)
PmeForceSenderGpu
(
gmx
)
t_edflood
(
anonymous_namespace{edsam.cpp}
)
BasicHistogramImpl
(
gmx::internal
)
gmx_ana_index_t
KeyValueTreeUniformArrayBuilder
(
gmx
)
PmeGpu
t_edvecs
(
anonymous_namespace{edsam.cpp}
)
BasicVector
(
gmx
)
gmx_ana_indexgrps_t
KeyValueTreeValueBuilder
(
gmx
)
PmeGpuAtomParams
t_eigvec
(
anonymous_namespace{edsam.cpp}
)
BenchmarkSystem
(
gmx
)
gmx_ana_indexmap_t
KeywordDetailsHelpTopic
(
gmx::anonymous_namespace{selhelp.cpp}
)
PmeGpuConstParams
t_filenm
BerendsenTemperatureCoupling
(
gmx
)
gmx_ana_pos_t
KeywordsHelpTopic
(
gmx::anonymous_namespace{selhelp.cpp}
)
PmeGpuDynamicParams
t_forcetable
Bias
(
gmx
)
gmx_ana_poscalc_t
L
PmeGpuGridParams
t_mapping
BiasCoupledToSystem
(
gmx
)
gmx_ana_selcollection_t
PmeGpuKernelParamsBase
t_matrix
BiasFepLambdaStateTest
(
gmx::test
)
gmx_ana_selmethod_help_t
LastStepSignaller
(
gmx
)
PmeGpuProgram
t_mdatoms
BiasGrid
(
gmx
)
gmx_ana_selmethod_t
layout_right
(
gmx
)
PmeGpuProgramImpl
t_methoddata_compare
BiasOutputSetup
gmx_ana_selparam_t
LeapFrogKernel
PmeGpuSettings
t_methoddata_distance
BiasParams
(
gmx
)
gmx_ana_selvalue_t
LeapFrogTest
(
gmx::test::anonymous_namespace{leapfrog.cpp}
)
PmeGpuSpecific
t_methoddata_kweval
BiasState
(
gmx
)
gmx_cache_protect_t
LeapFrogTestParameters
(
gmx::test::anonymous_namespace{leapfrog.cpp}
)
PmeGpuStaging
t_methoddata_kwint
BiasStateTest
(
gmx::test
)
gmx_device_runtime_data_t
LegacyEnumOption
(
gmx
)
PmeLoadBalanceHelper
(
gmx
)
t_methoddata_kwreal
BiasTest
(
gmx::test
)
gmx_domdec_constraints_t
LegacyInput
(
gmx
)
PmePpCommGpu
(
gmx
)
t_methoddata_kwstr
(
anonymous_namespace{sm_keywords.cpp}
)
BiasWriter
(
gmx
)
gmx_domdec_specat_comm_t
LegacyMdrunOptions
(
gmx
)
PmeShared
t_methoddata_pos
BinaryInformationSettings
(
gmx
)
gmx_enerdata_t
LegacySimulator
(
gmx
)
PmeSolveKernel
t_methoddata_same
bonded_threading_t
gmx_enfrot
LegacySimulatorData
(
gmx
)
PmeTest
(
gmx::test::anonymous_namespace{pmetest.cpp}
)
t_nbparam
BondedInteraction
gmx_enfrotgrp
Lincs
(
gmx
)
PointState
(
gmx
)
t_oriresdata
BondedInteractionList
gmx_ffparams_t
LincsDeviations
(
gmx
)
GaussianSpreadKernelParameters::PositionAndAmplitude
(
gmx
)
t_pargs
BondedInteractionsTest
(
gmx::test
)
gmx_fft_fftpack
LincsGpu
(
gmx
)
PositionCalculationCollection
(
gmx
)
t_partition_item
BooleanOption
(
gmx
)
gmx_fft_fftw3
LinkFrontier
(
gmx
)
PotentialPointData
(
gmx
)
t_pbc
BooleanOptionInfo
(
gmx
)
gmx_fft_mkl
ListedForces
PpCommManager
(
gmx
)
t_pullcoord
BooleanOptionStorage
(
gmx
)
gmx_ga2la_t
ListInput
(
gmx::test::anonymous_namespace{pairs.cpp}
)
PpRanks
t_register_method
BoundingBox
(
Nbnxm
)
gmx_help_make_index_group
ListInput
(
gmx::test::anonymous_namespace{nb_free_energy.cpp}
)
PreprocessingAtomTypes
t_state
BoundingBox1D
(
Nbnxm
)
gmx_hw_opt_t
ListOfLists
(
gmx
)
PreprocessingBondAtomType
t_swap
BoxDeformationHandle
(
gmx
)
gmx_kernel_timing_data_t
LocalAtomSet
(
gmx
)
PreprocessResidue
t_symbuf
TopologyHolder::Builder
(
gmx
)
gmx_localtop_t
LocalAtomSetManager
(
gmx
)
PrintReplicaExchangeParametersToString
(
gmx::test
)
t_UmbrellaHeader
BuildMDModulesNotifier
(
gmx
)
gmx_molblock_t
LocalTopologyChecker
(
gmx
)
HardwareTopology::ProcessingUnit
(
gmx
)
t_UmbrellaWindow
BuildMDModulesNotifier< CurrentCallParameter, CallParameter...>
(
gmx
)
gmx_moltype_t
LogEntryWriter
(
gmx
)
Profiling
(
gmx
)
t_xpmelmt
BuildMDModulesNotifier<>
(
gmx
)
gmx_multisim_t
LoggerBuilder
(
gmx
)
Propagator
(
gmx
)
TabulatedNormalDistribution
(
gmx
)
C
gmx_pme_comm_n_box_t
LoggerOwner
(
gmx
)
PropagatorConnection
(
gmx
)
Task
(
gmx
)
gmx_pme_comm_vir_ene_t
LoggerTestHelper
(
gmx::test
)
PropagatorTag
(
gmx
)
TemperatureCouplingData
(
gmx
)
HardwareTopology::Cache
(
gmx
)
gmx_pme_pp
LoggingSignaller
(
gmx
)
PTCouplingArrays
(
gmx
)
TerminationHelper
(
gmx::test
)
CacheLineAlignedFlag
(
gmx
)
gmx_potfit
HardwareTopology::LogicalProcessor
(
gmx
)
pull_coord_work_t
TestDevice
(
gmx::test
)
CalculateAcceptanceWeightSimple
(
gmx::test::anonymous_namespace{expanded.cpp}
)
gmx_repl_ex
CpuInfo::LogicalProcessor
(
gmx
)
pull_group_work_t
TestException
(
gmx::test
)
cellInfo
(
gmx
)
gmx_reverse_top_t
LogLevelHelper
(
gmx
)
PullCoordExpressionParser
(
gmx
)
TestFileInputRedirector
(
gmx::test
)
ChainIdFiller
gmx_sel_evaluate_t
LogWriteHelper
(
gmx
)
DimParams::PullDimParams
(
gmx
)
TestFileManager
(
gmx::test
)
CheckpointData
(
gmx
)
gmx_sel_lexer_t
M
PullElement
(
gmx
)
TestFileOutputRedirector
(
gmx::test
)
CheckpointDataTest
(
gmx::test::anonymous_namespace{checkpointdata.cpp}
)
gmx_sel_mempool_block_t
PullIntegrationTest
(
gmx::test::anonymous_namespace{pull.cpp}
)
TestHardwareEnvironment
(
gmx::test
)
CheckpointError
(
gmx
)
gmx_sel_mempool_t
HardwareTopology::Machine
(
gmx
)
Q
TestOptionsProvider
(
gmx::test
)
CheckpointHandler
(
gmx
)
gmx_slabdata
ManualOutputFile
(
gmx::test::anonymous_namespace{extract_cluster.cpp}
)
TestOptionsRegistry
(
gmx::test::anonymous_namespace{testoptions.cpp}
)
CheckpointHeaderContents
gmx_sparsematrix
MappedUnionFinder
(
gmx
)
QMInputFileName
(
gmx
)
TestProgramContext
(
gmx::test::anonymous_namespace{testinit.cpp}
)
CheckpointHelper
(
gmx
)
gmx_specatsend_t
layout_right::mapping
(
gmx
)
QMMM
(
gmx::anonymous_namespace{qmmm.cpp}
)
TestReferenceChecker
(
gmx::test
)
CheckpointHelperBuilder
(
gmx
)
gmx_tng_trajectory
MaxNumFrames
(
gmx::test
)
QMMMForceProvider
(
gmx
)
TestReferenceData
(
gmx::test
)
CheckpointOptions
(
gmx
)
gmx_wallclock_gpu_nbnxn_t
MD5Checksum
QMMMInputGenerator
(
gmx
)
TestReferenceDataImpl
(gmx::test::internal)
cl_nbparam_params
gmx_wallclock_gpu_pme_t
MDAtoms
(
gmx
)
QMMMModuleInfo
(
gmx
)
TestSystem
(
gmx::test::anonymous_namespace{pmegathertest.cpp}
)
ClfftInitializer
(
gmx
)
gmx_walltime_accounting
MDLogger
(
gmx
)
QMMMOptions
(
gmx
)
TestValues::TestValueGenerator
(
gmx::test::anonymous_namespace{checkpointdata.cpp}
)
ClHandle
(
gmx
)
Gpu3dFft
(
gmx
)
MDModules
(
gmx
)
QMMMOutputProvider
(
gmx::anonymous_namespace{qmmm.cpp}
)
TestValues
(
gmx::test::anonymous_namespace{checkpointdata.cpp}
)
CMainCommandLineModule
(
gmx::anonymous_namespace{cmdlinemodulemanager.cpp}
)
gpu_plist
(
Nbnxm
)
MDModulesCheckpointReadingBroadcast
(
gmx
)
QMMMParameters
(
gmx
)
TextFileMatch
(
gmx::test
)
TextTableFormatter::Impl::ColumnData
(
gmx
)
GpuEventSynchronizer
MDModulesCheckpointReadingDataOnMaster
(
gmx
)
QMMMSimulationParameterSetup
(
gmx::anonymous_namespace{qmmm.cpp}
)
TextInputFile
(
gmx
)
COMInPlaceTest
(
gmx::test::anonymous_namespace{com.cpp}
)
GpuForceReduction
(
gmx
)
MDModulesEnergyOutputToDensityFittingRequestChecker
(
gmx
)
QMMMTopologyInfo
(
gmx
)
TextInputStream
(
gmx
)
CommandLine
(
gmx::test
)
GpuHaloExchange
(
gmx
)
MDModulesEnergyOutputToQMMMRequestChecker
(
gmx
)
QMMMTopologyPreprocessor
(
gmx
)
TextLineWrapper
(
gmx
)
CommandLineCommonOptionsHolder
(
gmx
)
GpuRegionTimerImpl
MDModulesNotifier
(
gmx
)
QuadraticSplineTable
(
gmx
)
TextLineWrapperSettings
(
gmx
)
CommandLineHelpContext
(
gmx
)
GpuRegionTimerWrapper
MDModulesNotifiers
(
gmx
)
R
TextOutputFile
(
gmx
)
CommandLineHelpModule
(
gmx
)
GpuTaskAssignments
(
gmx
)
MDModulesWriteCheckpointData
(
gmx
)
TextOutputStream
(
gmx
)
CommandLineHelpWriter
(
gmx
)
GpuTaskAssignmentsBuilder
(
gmx
)
MdrunCompressedXOutputTest
(
anonymous_namespace{compressed_x_output.cpp}
)
Range
(
gmx
)
TextReader
(
gmx
)
CommandLineModuleGroup
(
gmx
)
GpuTaskMapping
(
gmx
)
MdRunInputFilename
(
gmx
)
RangeError
(
gmx
)
TextReaderTest
(
gmx::test::anonymous_namespace{textreader.cpp}
)
CommandLineModuleGroupData
(
gmx
)
GpuTimers
(
Nbnxm
)
Mdrunner
(
gmx
)
RangePartitioning
(
gmx
)
TextReaderTestParams
(
gmx::test::anonymous_namespace{textreader.cpp}
)
CommandLineModuleManager
(
gmx
)
Grid
(
Nbnxm
)
MdrunnerBuilder
(
gmx
)
ObservablesReducerIntegrationTest::RankData
(
gmx::test::anonymous_namespace{observablesreducer.cpp}
)
TextTableFormatter
(
gmx
)
CommandLineModuleManagerTestBase
(
gmx::test
)
GridAxis
(
gmx
)
MdrunNoAppendContinuationIsExact
(
gmx::test::anonymous_namespace{exactcontinuation.cpp}
)
Rdf
(
gmx::analysismodules::anonymous_namespace{rdf.cpp}
)
TextWriter
(
gmx
)
CommandLineModuleSettings
(
gmx
)
GridPoint
(
gmx
)
MdrunOptions
(
gmx
)
RdfModuleData
(
gmx::analysismodules::anonymous_namespace{rdf.cpp}
)
thread_work_t
CommandLineParser
(
gmx
)
GridSet
(
Nbnxm
)
MdrunRerunTest
(
gmx::test::anonymous_namespace{rerun.cpp}
)
ReadCheckpointDataHolder
(
gmx
)
ThreadedForceBuffer
(
gmx
)
CommandLineProgramContext
(
gmx
)
GridSetData
(
Nbnxm
)
MdrunTestFixture
(
gmx::test
)
RealFunctionvalueAtCoordinate
(
gmx
)
ThreadForceBuffer
(
gmx
)
CommandLineTestBase
(
gmx::test
)
GridWork
(
Nbnxm
)
MdrunTestFixtureBase
(
gmx::test
)
ReduceKernel
ThreadingInfo
(
gmx
)
CommandLineTestHelper
(
gmx::test
)
GromacsException
(
gmx
)
MembedHolder
(
gmx
)
ReferenceFileNames
(
gmx::test
)
ThreeFry2x64
(
gmx
)
CommandsHelpTopic
(
gmx::anonymous_namespace{cmdlinehelpmodule.cpp}
)
GromppMtsOpts
(
gmx
)
MempoolGroupReserver
(
anonymous_namespace{evaluate.cpp}
)
StatePropagatorData::ReferenceTemperatureHelper
(
gmx
)
ThreeFry2x64Fast
(
gmx
)
SimdMathTest::CompareSettings
(
gmx::test
)
GromppTest
(
anonymous_namespace{grompp.cpp}
)
MempoolSelelemReserver
(
anonymous_namespace{evaluate.cpp}
)
ReferenceTemperatureManager
(
gmx
)
ThreeFry2x64General
(
gmx
)
CompositeHelpTopic
(
gmx
)
OptionSectionImpl::Group
(
gmx::internal
)
MessageStringCollector
(
gmx
)
RepeatingOptionSection
(
gmx
)
ThrowLocation
(
gmx
)
CompositeSimulatorElement
(
gmx
)
H
MessageStringContext
(
gmx
)
RepeatingOptionSectionHandle
(
gmx
)
TimeOptionScaler
(
gmx::anonymous_namespace{timeunitmanager.cpp}
)
ComputeGlobalsElement
(
gmx
)
MessageWriterFileNoThrow
(
gmx::anonymous_namespace{exceptions.cpp}
)
RepeatingOptionSectionStorage
(
gmx
)
TimeStep
(
gmx
)
ConfMatch
(
gmx::test
)
HardwareTopology
(
gmx
)
MessageWriterString
(
gmx::anonymous_namespace{exceptions.cpp}
)
ReplicaExchangeParameters
TimeUnitBehavior
(
gmx
)
Constraints
(
gmx
)
HashedMap
(
gmx
)
MessageWriterTextWriter
(
gmx::anonymous_namespace{exceptions.cpp}
)
SelectionOptionManager::Impl::RequestsClearer
(
gmx
)
TimeUnitManager
(
gmx
)
ConstraintsElement
(
gmx
)
HelpExportCompletion
(
gmx::anonymous_namespace{cmdlinehelpmodule.cpp}
)
methoddata_insolidangle
RequireEvenRankCountWithAtLeastFourRanks
(
gmx::test::anonymous_namespace{threadaffinity_mpi.cpp}
)
TimingOptions
(
gmx
)
ConstraintsParam
(
gmx
)
HelpExportReStructuredText
(
gmx::anonymous_namespace{cmdlinehelpmodule.cpp}
)
methoddata_merge
RequireMinimumRankCount
(
gmx::test
)
TimingTest
(
gmx::test::anonymous_namespace{timing.cpp}
)
ConstraintsTest
(
gmx::test::anonymous_namespace{constr.cpp}
)
HelpLinks
(
gmx
)
methoddata_permute
RequireRankCount
(
gmx::test
)
ToleranceError
(
gmx
)
ContinuationFramePairManager
(
gmx::test::anonymous_namespace{exactcontinuation.cpp}
)
HelpManager
(
gmx
)
MimicCommunicator
(
gmx
)
ResetHandler
(
gmx
)
KeyValueTreeTransformRuleBuilder::ToObject
(
gmx
)
ConvertTprInfo
(
gmx
)
HelpWriterContext
(
gmx
)
MimicTest
(
gmx::test
)
RestraintForceProvider
(
gmx
)
TopologyData
(
gmx
)
CorrelationBlockData::CoordData
(
gmx
)
HistogramSize
(
gmx
)
MindistAction
(
gmx::anonymous_namespace{nbsearch.cpp}
)
RestraintManager
(
gmx
)
TopologyHolder
(
gmx
)
CoordinatesAndBoxPreprocessed
(
gmx
)
history_t
MissingElementConnectionError
(
gmx
)
RestraintMDModule
(
gmx
)
TopologyInformation
(
gmx
)
CoordState
(
gmx
)
HostAllocationPolicy
(
gmx
)
MockAverageHistogram
(
anonymous_namespace{histogram.cpp}
)
RestraintMDModuleImpl
(
gmx
)
TopologyManager
(
gmx::test
)
HardwareTopology::Core
(
gmx
)
HostAllocatorTest
(
gmx::test
)
MockHardwareTopologyTest
(
gmx::test::anonymous_namespace{mockhardwaretopology.cpp}
)
ReverseTopOptions
KeyValueTreeTransformRuleBuilder::ToValue
(
gmx
)
BoundingBox::Corner
(
Nbnxm
)
HostAllocatorTestNoMem
(
gmx::test
)
MockModule
(
gmx::test
)
RocfftInitializer
(
gmx::anonymous_namespace{gpu_3dfft_sycl_rocfft.cpp}
)
TpiTest
(
gmx::test::anonymous_namespace{tpitest.cpp}
)
DispersionCorrection::Correction
HostAllocatorTestNoMemCopyable
(
gmx::test
)
MockOption
(
anonymous_namespace{abstractoptionstorage.cpp}
)
RocfftPlan
(
gmx::anonymous_namespace{gpu_3dfft_sycl_rocfft.cpp}
)
TprAndFileManager
(
gmx::test
)
CorrelationBlockData
(
gmx
)
HostInteractionList
(
gmx
)
MockOptionsModule
(
gmx::test
)
RootHelpTopic
(
gmx::anonymous_namespace{cmdlinehelpmodule.cpp}
)
TpxFileHeader
CorrelationGrid
(
gmx
)
HostMemoryTest
(
gmx::test
)
MockOptionStorage
(
anonymous_namespace{abstractoptionstorage.cpp}
)
RstParagraphIterator
(
gmx
)
TrajectoryAnalysisCommandLineRunner
(
gmx
)
CorrelationTensor
(
gmx
)
I
ModularSimulator
(
gmx
)
RVecMatcher
(
gmx::test
)
TrajectoryAnalysisModule
(
gmx
)
CpuInfo
(
gmx
)
ModularSimulatorAlgorithm
(
gmx
)
S
TrajectoryAnalysisModuleData
(
gmx
)
Constraints::CreationHelper
(
gmx
)
IAnalysisDataModule
(
gmx
)
ModularSimulatorAlgorithmBuilder
(
gmx
)
TrajectoryAnalysisModuleDataBasic
(
gmx::anonymous_namespace{analysismodule.cpp}
)
CrossCorrelationEvaluationHelperValues
(
gmx::anonymous_namespace{densityfit.cpp}
)
ICheckpointHelperClient
(
gmx
)
ModularSimulatorAlgorithmBuilderHelper
(
gmx
)
Sasa
(
gmx::analysismodules::anonymous_namespace{sasa.cpp}
)
TrajectoryAnalysisModuleTestFixture
(
gmx::test
)
CrossCorrelationGradientAtVoxel
(
gmx::anonymous_namespace{densityfit.cpp}
)
NbnxnPairlistCpuWork::IClusterData
ModularSimulatorError
(
gmx
)
SasaModuleData
(
gmx::analysismodules::anonymous_namespace{sasa.cpp}
)
TrajectoryAnalysisRunnerCommon
(
gmx
)
CrystallographicLabels
(
gmx
)
ICommandLineModule
(
gmx
)
ModuleHelpTopic
(
gmx::anonymous_namespace{cmdlinehelpmodule.cpp}
)
ScalarDataTypes
TrajectoryAnalysisSettings
(
gmx
)
CubicSplineTable
(
gmx
)
ICommandLineOptionsModule
(
gmx
)
AnalysisDataModuleManager::Impl::ModuleInfo
(
gmx
)
ScalingMatrix
(
gmx
)
TrajectoryComparison
(
gmx::test
)
D
ICommandLineOptionsModuleSettings
(
gmx
)
ModuleSelection
(
gmx::test
)
SearchCycleCounting
TrajectoryElement
(
gmx
)
IdentityFormatter
(
gmx
)
ModuleTest
(
gmx::test
)
Selection
(
gmx
)
TrajectoryElementBuilder
(
gmx
)
DataFileFinder
(
gmx
)
IDomDecHelperClient
(
gmx
)
MolecularTopologyAtomIndices
SelectionCollection
(
gmx
)
TrajectoryFileOpener
(
gmx
)
DataFileInfo
(
gmx
)
IEnergySignallerClient
(
gmx
)
MoleculeBlockIndices
SelectionData
(
gmx::internal
)
TrajectoryFrame
(
gmx
)
DataFileOptions
(
gmx
)
IExceptionInfo
(
gmx::internal
)
MoleculeData
(
gmx::analysismodules::anonymous_namespace{msd.cpp}
)
SelectionEvaluator
(
gmx
)
TrajectoryFrameMatchSettings
(
gmx::test
)
DataStorageRequester
(
gmx::test::anonymous_namespace{mock_datamodule.cpp}
)
IExecutableEnvironment
(
gmx
)
MoleculeInformation
SelectionFileOption
(
gmx
)
TrajectoryFrameReader
(
gmx::test
)
dd_corners_t
IFileInputRedirector
(
gmx
)
MoleculePatch
SelectionFileOptionInfo
(
gmx
)
TrajectoryFrameWriter
(
gmx
)
DDBalanceRegionHandler
IFileMatcher
(
gmx::test
)
MoleculePatchDatabase
SelectionFileOptionStorage
(
gmx
)
TrajectoryFrameWriterTest
(
gmx::test
)
DDGridSetup
IFileMatcherSettings
(
gmx::test
)
MoleculeType
SelectionLocation
(
gmx
)
TrajectorySignaller
(
gmx
)
DDPairInteractionRanges
IFileOutputRedirector
(
gmx
)
MrcDataStatistics
(
gmx
)
SelectionOption
(
gmx
)
TrajectoryTolerances
(
gmx::test
)
DefaultExecutableEnvironment
(
gmx::anonymous_namespace{cmdlineprogramcontext.cpp}
)
IForceProvider
(
gmx
)
MrcDensityMapHeader
(
gmx
)
SelectionOptionBehavior
(
gmx
)
TranslateAndScale
(
gmx
)
DefaultInitializationAllocator
(
gmx
)
IHelpExport
(
gmx::anonymous_namespace{cmdlinehelpmodule.cpp}
)
MrcDensityMapOfFloatFromFileReader
(
gmx
)
SelectionOptionInfo
(
gmx
)
U
DefaultInputRedirector
(
gmx::anonymous_namespace{fileredirector.cpp}
)
IHelpTopic
(
gmx
)
MrcDensityMapOfFloatReader
(
gmx
)
SelectionOptionManager
(
gmx
)
DefaultOutputRedirector
(
gmx::anonymous_namespace{fileredirector.cpp}
)
IKeyValueTreeTransformRules
(
gmx
)
MrcDensityMapOfFloatWriter
(
gmx
)
SelectionOptionStorage
(
gmx
)
UmbrellaOptions
DefaultProgramContext
(
gmx::anonymous_namespace{programcontext.cpp}
)
ILastStepSignallerClient
(
gmx
)
MrcDensitySkewData
(
gmx
)
SelectionParserParameter
(
gmx
)
UniformIntDistribution
(
gmx
)
DensityFitting
(
gmx::anonymous_namespace{densityfitting.cpp}
)
ilist_data_t
Msd
(gmx::analysismodules)
SelectionParserSymbol
(
gmx
)
UniformRealDistribution
(
gmx
)
DensityFittingAmplitudeLookup
(
gmx
)
iListInput
(
gmx::test::anonymous_namespace{bonded.cpp}
)
MsdData::MsdColumnProxy
(
gmx::analysismodules::anonymous_namespace{msd.cpp}
)
SelectionParserSymbolIterator
(
gmx
)
UnionFinder
(
gmx
)
DensityFittingForce
(
gmx
)
IListIterator
MsdCoordinateManager
(
gmx::analysismodules::anonymous_namespace{msd.cpp}
)
SelectionParserSymbolTable
(
gmx
)
UnitCellInfo
DensityFittingForceProvider
(
gmx
)
IListProxy
MsdData
(
gmx::analysismodules::anonymous_namespace{msd.cpp}
)
SelectionParserValue
(
gmx
)
Update
(
gmx
)
DensityFittingForceProviderState
(
gmx
)
IListRange
MsdGroupData
(
gmx::analysismodules::anonymous_namespace{msd.cpp}
)
SelectionPosition
(
gmx
)
UpdateGroups
(
gmx
)
DensityFittingModuleInfo
(
gmx
)
ILoggingSignallerClient
(
gmx
)
MsdMatcher
(
gmx::test::anonymous_namespace{msd.cpp}
)
SelectionOptionManager::Impl::SelectionRequest
(
gmx
)
UpdateGroupsCog
(
gmx
)
DensityFittingOptions
(
gmx
)
ILogTarget
(
gmx
)
MtsLevel
(
gmx
)
SelectionTopologyProperties
(
gmx
)
UpdateGroupsTest
(
gmx::anonymous_namespace{updategroups.cpp}
)
DensityFittingOutputProvider
(
gmx
)
IMDEnergyBlock
(
gmx
)
MttkBoxScaling
(
gmx
)
SelectionTreeElement
(
gmx
)
UserInputError
(
gmx
)
DensityFittingParameters
(
gmx
)
IMDHeader
(
gmx
)
MttkData
(
gmx
)
SelelemTemporaryValueAssigner
(
anonymous_namespace{evaluate.cpp}
)
V
DensityFittingSimulationParameterSetup
(
gmx::anonymous_namespace{densityfitting.cpp}
)
IMDModule
(
gmx
)
MttkElement
(
gmx
)
SelMethodEvalContext
(
gmx
)
DensityFittingTest
(
gmx::test
)
ImdOptions
(
gmx
)
MttkPropagatorConnection
(
gmx
)
SeparatePmeRanksPermitted
(
gmx
)
VelocityScalingTemperatureCoupling
(
gmx
)
DensitySimilarityCrossCorrelation
(
gmx::anonymous_namespace{densityfit.cpp}
)
IMDOutputProvider
(
gmx
)
MttkPropagatorConnectionDetails
(
gmx
)
SetAtoms
(
gmx
)
VirtualSiteTest::VirtualSite
(
gmx::test::anonymous_namespace{virtualsites.cpp}
)
DensitySimilarityInnerProduct
(
gmx::anonymous_namespace{densityfit.cpp}
)
IMdpOptionProvider
(
gmx
)
MultiDimArray
(
gmx
)
SetAtomsSupportedFiles
(
gmx::test
)
VirtualSiteTopology::VirtualSiteAngle
DensitySimilarityMeasure
(
gmx
)
IMDSocket
(
gmx
)
MultiSimTest
(
gmx::test
)
SetAtomsTest
(
gmx::test
)
VirtualSiteTopology::VirtualSiteBond
DensitySimilarityRelativeEntropy
(
gmx::anonymous_namespace{densityfit.cpp}
)
IMessageWriter
(
gmx::anonymous_namespace{exceptions.cpp}
)
N
SetAtomsUnSupportedFiles
(
gmx::test
)
VirtualSiteConfiguration
DevelopmentFeatureFlags
(
gmx
)
Update::Impl
SetBothTimeTest
(
gmx::test
)
VirtualSitesHandler
(
gmx
)
HardwareTopology::Device
(
gmx
)
gmx_reverse_top_t::Impl
NBAtomDataGpu
SetBox
(
gmx
)
VirtualSiteTopology
DeviceDetectionResult
(
gmx
)
VirtualSitesHandler::Impl
(
gmx
)
NbnxmGpu
SetForces
(
gmx
)
VRescaleTemperatureCoupling
(
gmx
)
DeviceInformation
UpdateConstrainGpu::Impl
(
gmx
)
NbnxmKernel
SetForceSupportedFiles
(
gmx::test
)
VsiteAtomMapping
DeviceStream
TrajectoryAnalysisSettings::Impl
(
gmx
)
NbnxmKernelPruneOnly
SetForceUnSupportedFiles
(
gmx::test
)
VsiteBondedInteraction
DeviceStreamManager
(
gmx
)
TrajectoryAnalysisModuleData::Impl
(
gmx
)
nbnxn_atomdata_output_t
SetPrecision
(
gmx
)
VsiteBondParameter
DeviceStreamManagerTest
(
gmx::test::anonymous_namespace{device_stream_manager.cpp}
)
TrajectoryAnalysisModule::Impl
(
gmx
)
nbnxn_atomdata_t
SetPrecisionSupportedFiles
(
gmx::test
)
VsiteThread
(
gmx
)
df_history_t
TextTableFormatter::Impl
(
gmx
)
nbnxn_ci_t
SetPrecisionUnSupportedFiles
(
gmx::test
)
W
Grid::Dimensions
(
Nbnxm
)
TextReader::Impl
(
gmx
)
nbnxn_cj4_t
SetStartTime
(
gmx
)
DimParams
(
gmx
)
TestReferenceChecker::Impl
(
gmx::test
)
nbnxn_cj_t
SetStartTimeTest
(
gmx::test
)
WaterMolecule
(
gmx
)
DipoleData
TestFileManager::Impl
(
gmx::test
)
nbnxn_cycle_t
SetTimeStep
(
gmx
)
WholeMoleculeTransform
(
gmx
)
DirectoryEnumerator
(
gmx
)
MockAnalysisDataModule::Impl
(
gmx::test
)
nbnxn_excl_t
SetTimeStepTest
(
gmx::test
)
WorkDivision
AtomDistribution::DomainAtomGroups
SelectionParserSymbolTable::Impl
(
gmx
)
nbnxn_im_ei_t
SettleData
(
gmx
)
WrapperToString
(
gmx::anonymous_namespace{helpwritercontext.cpp}
)
DomainDecompositionBuilder
(
gmx
)
SelectionParserSymbolIterator::Impl
(
gmx
)
nbnxn_sci
SettleGpu
(
gmx
)
WrapperToVector
(
gmx::anonymous_namespace{helpwritercontext.cpp}
)
DomainDecompositionSpecialCasesTest
(
anonymous_namespace{domain_decomposition.cpp}
)
SelectionParserSymbol::Impl
(
gmx
)
NbnxnPairlistCpu
SettleTest
(
gmx::test::anonymous_namespace{settle.cpp}
)
WriteCheckpointDataHolder
(
gmx
)
DomainInfo
(
gmx
)
SelectionOptionManager::Impl
(
gmx
)
NbnxnPairlistCpuWork
SettleTestParameters
(
gmx::test::anonymous_namespace{settle.cpp}
)
X
DomainLifetimeWorkload
(
gmx
)
SelectionCollection::Impl
(
gmx
)
NBParamGpu
SetVelocities
(
gmx
)
GridSet::DomainSetup
(
Nbnxm
)
RestraintManager::Impl
(
gmx
)
NBStagingData
SetVelocitySupportedFiles
(
gmx::test
)
GpuTimers::XFTransfers
(
Nbnxm
)
DomDecHelper
(
gmx
)
PositionCalculationCollection::Impl
(
gmx
)
NeighborSearchSignaller
(
gmx
)
SetVelocityUnSupportedFiles
(
gmx::test
)
XvgMatch
(
gmx::test
)
DomDecHelperBuilder
(
gmx
)
PmePpCommGpu::Impl
(
gmx
)
NelderMeadParameters
(
gmx::anonymous_namespace{neldermead.cpp}
)
shakedata
(
gmx
)
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|
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|
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|
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|
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|
K
|
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|
M
|
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|
O
|
P
|
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|
R
|
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|
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|
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|
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|
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|
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