utility Directory Reference

Directory dependency graph for utility:

Description

Low-Level Utilities (utility)

Directories
directory	tests
	Unit tests for Low-Level Utilities (utility).

Files
file	alignedallocator.cpp
file	alignedallocator.h
	Declares allocation policy classes and allocators that are used to make library containers compatible with alignment requirements of particular hardware, e.g. memory operations for SIMD or accelerators.
file	allocator.h
	Declares gmx::Allocator template whose allocation functionality is configured both by type of object allocated and a policy class that configures the necessary matching malloc and free operation.
file	any.cpp
file	any.h
	Declares gmx::Any.
file	arraysize.h
	Provides asize() function for calculating the static size of an array at compile time.
file	basenetwork.cpp
file	basenetwork.h
	Utility functions for basic MPI and network functionality.
file	baseversion.cpp
file	baseversion.h
	Declares functions to get basic version information.
file	baseversion_gen.h
file	binaryinformation.cpp
file	binaryinformation.h
	Helper functionality for information about the currently running binary.
file	bitmask.h
	Declares gmx_bitmask_t and associated functions.
file	classhelpers.h
	Declares common utility classes and macros.
file	compare.cpp
file	compare.h
	Utilities for comparing data structures (for gmx check).
file	coolstuff.cpp
file	coolstuff.h
	Functionality for printing cool strings.
file	cstringutil.cpp
file	cstringutil.h
	Generic C string handling functions.
file	cuda_version_information.h
file	datafilefinder.cpp
file	datafilefinder.h
	Declares gmx::DataFileFinder and related classes.
file	defaultinitializationallocator.h
	Declares an allocator that can use default initialization instead of values initialization. This is useful for improving performance of resize() in standard vectors for buffers in performance critical code.
file	dir_separator.h
	Provides OS-specific directory-name separator.
file	directoryenumerator.cpp
file	directoryenumerator.h
	Declares gmx::DirectoryEnumerator.
file	enumerationhelpers.h
	Defines helper types for class enumerations.
file	errorcodes.cpp
file	errorcodes.h
	Declares error codes and related functions for fatal error handling.
file	errorformat.cpp
file	errorformat.h
file	exceptions.cpp
file	fatalerror.cpp
file	fatalerror.h
	Declares fatal error handling and debugging routines for C code.
file	fileptr.h
	Declares guard pointer for RAII-style handling of cstdio FILE pointers.
file	fileredirector.cpp
file	fileredirector.h
	Declares gmx::IFileOutputRedirector.
file	filestream.cpp
file	filestream.h
	Declares implementations for textstream.h interfaces for file input/output.
file	fixedcapacityvector.h
	Declares gmx::FixedCapacityVector.
file	flags.h
	Declares gmx::FlagsTemplate.
file	futil.cpp
file	futil.h
	Low-level wrappers for OS-specific file handling with some GROMACS customizations.
file	gmxassert.cpp
file	gmxmpi.h
	Wraps mpi.h usage in Gromacs.
file	gmxomp.cpp
file	gmxomp.h
	Declares OpenMP wrappers to avoid conditional compilation.
file	ikeyvaluetreeerror.cpp
file	ikeyvaluetreeerror.h
	Declares an error handling interface for key-value tree operations.
file	init.cpp
file	init.h
	Declares functions for initializing the GROMACS library.
file	inmemoryserializer.cpp
file	inmemoryserializer.h
	Declares gmx::ISerializer implementation for in-memory serialization.
file	int64_to_int.cpp
file	int64_to_int.h
	Low-level utility for converting 64 bit int to int (the size of which is hardware dependent), printing a warning if an overflow will occur.
file	iserializer.h
	Declares a generic serialization interface that supports both directions.
file	keyvaluetree.cpp
file	keyvaluetree.h
	Declares a data structure for JSON-like structured key-value mapping.
file	keyvaluetreebuilder.h
	Declares classes for building the data structures in keyvaluetree.h.
file	keyvaluetreemdpwriter.cpp
file	keyvaluetreemdpwriter.h
	Declares a function to write a flat key-value tree to look like old-style mdp output.
file	keyvaluetreeserializer.cpp
file	keyvaluetreeserializer.h
	Declares serialization routines for KeyValueTree objects.
file	keyvaluetreetransform.cpp
file	keyvaluetreetransform.h
	Declares utilities for transforming key-value trees.
file	logger.cpp
file	logger.h
	Declares functionality for logging.
file	loggerbuilder.cpp
file	loggerbuilder.h
	Declares functionality for initializing logging.
file	mdmodulesnotifier.h
	Declares gmx::MDModulesNotifier and builder.
file	mdmodulesnotifiers.h
	Declares gmx::MDModulesNotifiers.
file	message_string_collector.cpp
file	message_string_collector.h
	Declares gmx::MessageStringCollector.
file	mpiinfo.cpp
file	mpiinfo.h
file	niceheader.cpp
file	niceheader.h
	Declares function for printing a nice header for text output files.
file	nodelete.h
	Declares no_delete deleter for std::shared_ptr.
file	path.cpp
file	path.h
	Declares functions for OS-independent path handling.
file	physicalnodecommunicator.cpp
file	physicalnodecommunicator.h
	Declares functionality for communicators across physical nodes.
file	pleasecite.cpp
file	pleasecite.h
	Declares please_cite() for printing out literature references. Declares writeSourceDoi for printing of source code DOI.
file	programcontext.cpp
file	programcontext.h
	Declares gmx::IProgramContext and related methods.
file	range.h
	Declares gmx::Range.
file	smalloc.cpp
file	smalloc.h
	C-style memory allocation routines for GROMACS.
file	snprintf.h
	Provide snprintf symbol on all OS (for internal Gromacs use)
file	strconvert.cpp
file	strconvert.h
	Declares common utility functions for conversions to and from strings.
file	strdb.cpp
file	strdb.h
	Declares C functions for reading files with a list of strings.
file	stringcompare.h
	Declares utility functionst for string comparison.
file	stringstream.cpp
file	stringstream.h
	Declares implementations for textstream.h interfaces for input/output to in-memory strings.
file	stringtoenumvalueconverter.h
	Defines helper function object for class enumerations.
file	stringutil.cpp
file	stringutil.h
	Declares common string utility and formatting routines.
file	sycl_version_information.cpp
file	sycl_version_information.h
file	sysinfo.cpp
file	sysinfo.h
	Declares functions that wrap platform-specific calls for obtaining information about the operating environment and the current process.
file	template_mp.h
	Declares utilities for template metaprogramming.
file	textreader.cpp
file	textreader.h
	Declares gmx::TextReader.
file	textstream.h
	Declares interfaces for simple input/output streams.
file	textwriter.cpp
file	textwriter.h
	Declares gmx::TextWriter.
file	txtdump.cpp
file	txtdump.h
	Declares helper functions for dumping basic data structures as text.
file	typetraits.h
	Declares type traits.
file	unique_cptr.h
	Declares gmx::unique_cptr and gmx::sfree_guard.