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Nbnxm::Grid Member List

This is the complete list of members for Nbnxm::Grid, including all inherited members.

atomIndexEnd() const Nbnxm::Gridinline
atomIsPerturbed(int clusterIndex, int atomIndexInCluster) const Nbnxm::Gridinline
atomToCluster(int atomIndex) const Nbnxm::Gridinline
calcColumnIndices(const Grid::Dimensions &gridDims, const gmx::UpdateGroupsCog *updateGroupsCog, gmx::Range< int > atomRange, gmx::ArrayRef< const gmx::RVec > x, int dd_zone, const int *move, int thread, int nthread, gmx::ArrayRef< int > cell, gmx::ArrayRef< int > cxy_na)Nbnxm::Gridstatic
cellOffset() const Nbnxm::Gridinline
clusterFlags() const Nbnxm::Gridinline
clusterIsPerturbed(int clusterIndex) const Nbnxm::Gridinline
cxy_ind() const Nbnxm::Gridinline
cxy_na() const Nbnxm::Gridinline
dimensions() const Nbnxm::Gridinline
fepBits(int clusterIndex) const Nbnxm::Gridinline
firstAtomInColumn(int columnIndex) const Nbnxm::Gridinline
firstCellInColumn(int columnIndex) const Nbnxm::Gridinline
geometry() const Nbnxm::Gridinline
Grid(PairlistType pairlistType, const bool &haveFep)Nbnxm::Grid
iBoundingBoxes() const Nbnxm::Gridinline
jBoundingBoxes() const Nbnxm::Gridinline
numAtomsInColumn(int columnIndex) const Nbnxm::Gridinline
numAtomsPerCell() const Nbnxm::Gridinline
numCells() const Nbnxm::Gridinline
numCellsColumnMax() const Nbnxm::Gridinline
numCellsInColumn(int columnIndex) const Nbnxm::Gridinline
numClusters() const Nbnxm::Gridinline
numClustersPerCell() const Nbnxm::Gridinline
numColumns() const Nbnxm::Gridinline
packedBoundingBoxes() const Nbnxm::Gridinline
paddedNumAtomsInColumn(int columnIndex) const Nbnxm::Gridinline
setCellIndices(int ddZone, int cellOffset, GridSetData *gridSetData, gmx::ArrayRef< GridWork > gridWork, gmx::Range< int > atomRange, const int *atinfo, gmx::ArrayRef< const gmx::RVec > x, int numAtomsMoved, nbnxn_atomdata_t *nbat)Nbnxm::Grid
setDimensions(int ddZone, int numAtoms, gmx::RVec lowerCorner, gmx::RVec upperCorner, real atomDensity, real maxAtomGroupRadius, bool haveFep, gmx::PinningPolicy pinningPolicy)Nbnxm::Grid
srcAtomBegin() const Nbnxm::Gridinline
srcAtomEnd() const Nbnxm::Gridinline
zBoundingBoxes() const Nbnxm::Gridinline