gmx::ColvarsOptions Member List

This is the complete list of members for gmx::ColvarsOptions, including all inherited members.

buildMdpOutput(KeyValueTreeObjectBuilder *builder) const override	gmx::ColvarsOptions	virtual
colvarsAtomCoords() const	gmx::ColvarsOptions
colvarsConfigContent() const	gmx::ColvarsOptions
colvarsEnsTemp() const	gmx::ColvarsOptions
colvarsFileName() const	gmx::ColvarsOptions
colvarsInputFiles() const	gmx::ColvarsOptions
colvarsOutputPrefix() const	gmx::ColvarsOptions
colvarsSeed() const	gmx::ColvarsOptions
IMdpOptionProvider()=default	gmx::IMdpOptionProvider	protected
IMdpOptionProvider(const IMdpOptionProvider &)=default (defined in gmx::IMdpOptionProvider)	gmx::IMdpOptionProvider	protected
IMdpOptionProvider(IMdpOptionProvider &&) noexcept=default (defined in gmx::IMdpOptionProvider)	gmx::IMdpOptionProvider	protected
initMdpOptions(IOptionsContainerWithSections *options) override	gmx::ColvarsOptions	virtual
initMdpTransform(IKeyValueTreeTransformRules *rules) override	gmx::ColvarsOptions	virtual
isActive() const	gmx::ColvarsOptions
logger() const	gmx::ColvarsOptions
operator=(const IMdpOptionProvider &)=default (defined in gmx::IMdpOptionProvider)	gmx::IMdpOptionProvider	protected
operator=(IMdpOptionProvider &&) noexcept=default (defined in gmx::IMdpOptionProvider)	gmx::IMdpOptionProvider	protected
processCoordinates(const CoordinatesAndBoxPreprocessed &coord)	gmx::ColvarsOptions
processEdrFilename(const EdrOutputFilename &filename)	gmx::ColvarsOptions
processTemperature(const EnsembleTemperature &temp)	gmx::ColvarsOptions
processTopology(gmx_mtop_t *mtop)	gmx::ColvarsOptions
readInternalParametersFromKvt(const KeyValueTreeObject &tree)	gmx::ColvarsOptions
setLogger(const MDLogger &logger)	gmx::ColvarsOptions
setParameters(const std::string &colvarsfile, const t_atoms &topology, ArrayRef< const RVec > coords, PbcType pbcType, const matrix boxValues, real temperature)	gmx::ColvarsOptions
writeInternalParametersToKvt(KeyValueTreeObjectBuilder treeBuilder)	gmx::ColvarsOptions
~IMdpOptionProvider() (defined in gmx::IMdpOptionProvider)	gmx::IMdpOptionProvider	inlineprotectedvirtual