gmxpreprocess Directory Reference

Directory dependency graph for gmxpreprocess:

Directories
directory	tests

Files
file	add_par.cpp
file	add_par.h
file	calch.cpp
file	calch.h
file	convparm.cpp
file	convparm.h
file	editconf.cpp
file	editconf.h
file	fflibutil.cpp
file	fflibutil.h
file	gen_ad.cpp
file	gen_ad.h
file	gen_maxwell_velocities.cpp
file	gen_maxwell_velocities.h
file	gen_vsite.cpp
file	gen_vsite.h
file	genconf.cpp
file	genconf.h
file	genhydro.cpp
file	genhydro.h
file	genion.cpp
file	genion.h
file	genrestr.cpp
file	genrestr.h
file	gmxcpp.cpp
file	gmxcpp.h
file	gpp_atomtype.cpp
file	gpp_atomtype.h
	Declares PreprocessingAtomType.
file	gpp_bond_atomtype.cpp
file	gpp_bond_atomtype.h
	Declares PreprocessingBondAtomType.
file	gpp_nextnb.cpp
file	gpp_nextnb.h
file	grompp.cpp
file	grompp.h
file	grompp_impl.h
file	h_db.cpp
file	h_db.h
file	hackblock.cpp
file	hackblock.h
	Methods to modify atoms during preprocessing.
file	hizzie.cpp
file	hizzie.h
file	insert_molecules.cpp
file	insert_molecules.h
file	makeexclusiondistances.cpp
file	makeexclusiondistances.h
file	massrepartitioning.cpp
file	massrepartitioning.h
file	nm2type.cpp
file	nm2type.h
file	notset.h
file	pdb2gmx.cpp
file	pdb2gmx.h
file	pdb2top.cpp
file	pdb2top.h
file	pgutil.cpp
file	pgutil.h
file	readir.cpp
file	readir.h
file	readpull.cpp
file	readrot.cpp
file	resall.cpp
file	resall.h
	Methods to get residue information during preprocessing.
file	solvate.cpp
file	solvate.h
file	specbond.cpp
file	specbond.h
file	ter_db.cpp
file	ter_db.h
file	tomorse.cpp
file	tomorse.h
file	topdirs.cpp
file	topdirs.h
file	topio.cpp
file	topio.h
file	toppush.cpp
file	toppush.h
file	topshake.cpp
file	topshake.h
file	toputil.cpp
file	toputil.h
file	vsite_parm.cpp
file	vsite_parm.h
file	x2top.cpp
file	x2top.h
file	xlate.cpp
file	xlate.h