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Here is a list of all documented namespace members with links to the namespaces they belong to:
- p -
P1 :
gmx
PaddedHostVector :
gmx
PageAlignedAllocator :
gmx
pageSize() :
gmx
Pair :
gmx
pairCountWithinCutoff() :
gmx
PairDistanceModuleTest :
anonymous_namespace{pairdist.cpp}
Parameters :
gmx::test::anonymous_namespace{pull_rotation.cpp}
parametersSets :
gmx::test::anonymous_namespace{energyoutput.cpp}
,
gmx::test::anonymous_namespace{leapfrog.cpp}
,
gmx::test::anonymous_namespace{settle.cpp}
ParrinelloRahmanTestParameters :
gmx::test::anonymous_namespace{parrinellorahman.cpp}
ParrinelloRahmanVelocityScaling :
gmx
ParrRahmTest :
gmx::test::anonymous_namespace{parrinellorahman.cpp}
parseCgroup1CpuLimit() :
gmx::anonymous_namespace{hardwaretopology.cpp}
parseCgroup2CpuLimit() :
gmx::anonymous_namespace{hardwaretopology.cpp}
parseCpuInfo() :
gmx::anonymous_namespace{hardwaretopology.cpp}
parseCpuString() :
gmx::anonymous_namespace{hardwaretopology.cpp}
parsedArrayFromInputString() :
gmx
parseGpuDeviceIdentifierList() :
gmx
parseProcCpuInfo() :
gmx::anonymous_namespace{cpuinfo.cpp}
parseSysFsCpuTopology() :
gmx::anonymous_namespace{hardwaretopology.cpp}
parseUserGpuIdString() :
gmx
parseUserTaskAssignmentString() :
gmx
PartlyUniformDiagonal :
gmx::test::anonymous_namespace{parrinellorahman.cpp}
Pause :
gmx
Pbc :
gmx
pbc_rvec_sub() :
anonymous_namespace{bonded.cpp}
,
gmx
PbcMode :
gmx
PBE :
gmx
pcomp() :
gmx
PdbAtomsSelection :
gmx::analysismodules::anonymous_namespace{select.cpp}
periodic_system :
gmx
PeriodicOutputParameters :
gmx::test
pick_nbnxn_kernel() :
Nbnxm
pick_nbnxn_kernel_cpu() :
Nbnxm
PinningPolicy :
gmx
placeCoordinatesWithCOMInBox() :
gmx
plainAssertHelper() :
gmx::test
Pme :
gmx
pme_gpu_transform_spline_atom_data() :
gmx::test
PmeBSplineModuliCorrectnessTest :
gmx::test::anonymous_namespace{pmebsplinetest.cpp}
PmeBSplineModuliFailureTest :
gmx::test::anonymous_namespace{pmebsplinetest.cpp}
pmeCorrDerivative() :
gmx::test::anonymous_namespace{splinetable.cpp}
pmeCorrF() :
Nbnxm
pmeCorrFunction() :
gmx::test::anonymous_namespace{splinetable.cpp}
pmeFinalizeTest() :
gmx::test
pmeForceCorrection() :
gmx
pmeForceCorrectionSingleAccuracy() :
gmx
pmeGetComplexGrid() :
gmx::test
pmeGetComplexGridInternal() :
gmx::test
pmeGetComplexGridSizesInternal() :
gmx::test
pmeGetGridAndSizesInternal() :
gmx::test
pmeGetGridAndSizesInternal< real >() :
gmx::test
pmeGetGridAndSizesInternal< t_complex >() :
gmx::test
pmeGetGridInternal() :
gmx::test
pmeGetGridlineIndices() :
gmx::test
pmeGetGridPlainIndexInternal() :
gmx::test
pmeGetRealGrid() :
gmx::test
pmeGetRealGridInternal() :
gmx::test
pmeGetRealGridSizesInternal() :
gmx::test
pmeGetReciprocalEnergyAndVirial() :
gmx::test
pmeGetSplineData() :
gmx::test
pmeGetSplineDataInternal() :
gmx::test
pmeInitAtoms() :
gmx::test
pmeInitEmpty() :
gmx::test
pmeInitWrapper() :
gmx::test
PmeLayoutTransform :
gmx::test
pmePerformGather() :
gmx::test
pmePerformSolve() :
gmx::test
pmePerformSplineAndSpread() :
gmx::test
pmePotentialCorrection() :
gmx
pmePotentialCorrectionSingleAccuracy() :
gmx
PmePpTransfer :
gmx
PmeSafePointer :
gmx::test
pmeSetComplexGrid() :
gmx::test
pmeSetGridInternal() :
gmx::test
pmeSetGridLineIndices() :
gmx::test
pmeSetRealGrid() :
gmx::test
pmeSetSplineData() :
gmx::test
PmeSolveAlgorithm :
gmx::test
PmeTestFlavor :
gmx::test::anonymous_namespace{pmetest.cpp}
Pmf :
gmx
,
anonymous_namespace{gmx_awh.cpp}
pointDistanceAlongAxis() :
gmx
pointsAlongLambdaAxis() :
gmx
pointsHaveDifferentLambda() :
gmx
populateMoleculeType() :
gmx::test::anonymous_namespace{com.cpp}
positions :
gmx::anonymous_namespace{updategroupscog.cpp}
Positions :
gmx
PositionsAndVelocities :
gmx
PositionsOnly :
gmx
posres() :
anonymous_namespace{position_restraints.cpp}
posres_dx() :
anonymous_namespace{position_restraints.cpp}
potentialEnergyToleranceForSystem_g :
gmx::test::anonymous_namespace{minimize.cpp}
potentialSwitchFunction() :
gmx
potentialSwitchFunctionDerivative() :
gmx
power12() :
gmx
power3() :
gmx
power4() :
gmx
power5() :
gmx
power6() :
gmx
PowerPC :
gmx
pp_pme :
gmx
PPStretches :
gmx::analysismodules::anonymous_namespace{dssp.cpp}
pr_sortblock() :
gmx
precisionToString() :
gmx::anonymous_namespace{handlerestart.cpp}
prepareAwhModule() :
gmx
prepareDefaultMdpFieldValues() :
gmx::test::anonymous_namespace{simulationdatabase.cpp}
prepareForAppending() :
gmx::anonymous_namespace{handlerestart.cpp}
prepareLogAppending() :
gmx
prepareLogFile() :
gmx
prepareMdpFieldValues() :
gmx::test
prepareMdpFileContents() :
gmx::test
PressureMatrixType :
gmx::test::anonymous_namespace{parrinellorahman.cpp}
pressureToleranceForSystem_g :
gmx::test::anonymous_namespace{pull.cpp}
,
gmx::test::anonymous_namespace{simple_mdrun.cpp}
print_bbsizes_simple() :
Nbnxm
print_bbsizes_supersub() :
Nbnxm
print_dd_statistics() :
gmx
print_IMD_error() :
gmx
printBinaryInformation() :
gmx
printCurrentStatus() :
gmx::anonymous_namespace{selectioncollection.cpp}
printFatalErrorFooter() :
gmx::internal
printFatalErrorHeader() :
gmx::internal
printFatalErrorMessage() :
gmx
printFatalErrorMessageLine() :
gmx::internal
printHelp() :
gmx::anonymous_namespace{selectioncollection.cpp}
,
gmx::test::anonymous_namespace{testinit.cpp}
printMissingInteractionsAtoms() :
gmx
printMissingInteractionsMolblock() :
gmx
PrintTo() :
gmx::test::anonymous_namespace{constr.cpp}
,
gmx
processExceptionAsFatalError() :
gmx
processExceptionAtExit() :
gmx
processExceptionAtExitForCommandLine() :
gmx
ProcessFrameConversionPointer :
gmx
ProcessorMap :
gmx::test::anonymous_namespace{mockhardwaretopology.cpp}
project_to_eigvectors() :
anonymous_namespace{edsam.cpp}
projectx() :
anonymous_namespace{edsam.cpp}
promptLine() :
gmx::anonymous_namespace{selectioncollection.cpp}
PropagationParameters :
gmx::test
propagationParametersWithConstraints() :
gmx::test
propagationParametersWithCoupling() :
gmx::test
PropagatorCallback :
gmx
PSwitch :
Nbnxm
Pull :
gmx
putAtomsInBox() :
gmx::test
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