Gromacs
2024.4
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#include <memory>
#include <vector>
#include "gromacs/math/vec.h"
#include "gromacs/math/vectypes.h"
#include "gromacs/utility/arrayref.h"
#include "gromacs/utility/basedefinitions.h"
#include "gromacs/utility/gmxassert.h"
#include "gromacs/utility/real.h"
API for neighborhood searching for analysis.
The main part of the API is the class gmx::AnalysisNeighborhood. See Neighborhood search for analysis tools for an overview.
The classes within this file can be used independently of the other parts of the selection module.
Classes | |
class | gmx::ListOfLists< typename > |
A list of lists, optimized for performance. More... | |
class | gmx::AnalysisNeighborhoodPositions |
Input positions for neighborhood searching. More... | |
class | gmx::AnalysisNeighborhood |
Neighborhood searching for analysis tools. More... | |
class | gmx::AnalysisNeighborhoodPair |
Value type to represent a pair of positions found in neighborhood searching. More... | |
class | gmx::AnalysisNeighborhoodSearch |
Initialized neighborhood search with a fixed set of reference positions. More... | |
class | gmx::AnalysisNeighborhoodPairSearch |
Initialized neighborhood pair search with a fixed set of positions. More... | |