selelem.cpp File Reference

#include "gmxpre.h"
#include "selelem.h"
#include <cstring>
#include <filesystem>
#include "gromacs/math/vectypes.h"
#include "gromacs/selection/indexutil.h"
#include "gromacs/selection/position.h"
#include "gromacs/selection/selectionenums.h"
#include "gromacs/selection/selparam.h"
#include "gromacs/selection/selvalue.h"
#include "gromacs/utility/exceptions.h"
#include "gromacs/utility/fatalerror.h"
#include "gromacs/utility/gmxassert.h"
#include "gromacs/utility/smalloc.h"
#include "gromacs/utility/stringutil.h"
#include "keywords.h"
#include "mempool.h"
#include "poscalc.h"
#include "selmethod.h"

Include dependency graph for selelem.cpp:

Description

Implements functions in selelem.h.

Author

Teemu Murtola teemu.nosp@m..mur.nosp@m.tola@.nosp@m.gmai.nosp@m.l.com

Functions
const char *	_gmx_selelem_type_str (const gmx::SelectionTreeElement &sel)
	Returns a string representation of the type of a gmx::SelectionTreeElement. More...
const char *	_gmx_sel_value_type_str (const gmx_ana_selvalue_t *val)
	Returns a string representation of the type of a gmx_ana_selvalue_t. More...
const char *	_gmx_selelem_boolean_type_str (const gmx::SelectionTreeElement &sel)
	Returns a string representation of the type of a gmx::SelectionTreeElement. More...
void	_gmx_selelem_set_vtype (const gmx::SelectionTreeElementPointer &sel, e_selvalue_t vtype)
	Sets the value type of a gmx::SelectionTreeElement. More...
void	_gmx_selelem_free_param (gmx_ana_selparam_t *param)
	Frees the memory allocated for a selection method parameter. More...
void	_gmx_selelem_free_method (gmx_ana_selmethod_t *method, void *mdata)
	Frees the memory allocated for a selection method. More...
void	_gmx_selelem_print_tree (FILE *fp, const gmx::SelectionTreeElement &sel, bool bValues, int level)
	Prints a human-readable version of a selection element subtree. More...

Function Documentation

const char* _gmx_sel_value_type_str

(

const gmx_ana_selvalue_t *

val

)

Returns a string representation of the type of a gmx_ana_selvalue_t.

Parameters

[in]

val

Value structore for which the string is requested.

Returns

Pointer to a string that corresponds to val->type, NULL if the type value is invalid.

The return value points to a string constant and should not be free'd.

const char* _gmx_selelem_boolean_type_str

(

const gmx::SelectionTreeElement &

sel

)

Returns a string representation of the type of a gmx::SelectionTreeElement.

Returns a string representation of the boolean type of a SEL_BOOLEAN gmx::SelectionTreeElement.

Parameters

[in]

sel

Selection for which the string is requested

Returns

Pointer to a string that corresponds to sel->type.

The return value points to a string constant and should not be free'd.

The function returns NULL if sel->type is not one of the valid values.

void _gmx_selelem_free_method	(	struct gmx_ana_selmethod_t *	method,
		void *	mdata
	)

Frees the memory allocated for a selection method.

Parameters

[in]	method	Method to free.
[in]	mdata	Method data to free.

void _gmx_selelem_free_param

(

struct gmx_ana_selparam_t *

param

)

Frees the memory allocated for a selection method parameter.

Parameters

[in]

param

Parameter to free.

void _gmx_selelem_print_tree	(	FILE *	fp,
		const gmx::SelectionTreeElement &	sel,
		bool	bValues,
		int	level
	)

Prints a human-readable version of a selection element subtree.

Parameters

[in]	fp	File handle to receive the output.
[in]	sel	Root of the selection subtree to print.
[in]	bValues	If true, the evaluated values of selection elements are printed as well.
[in]	level	Indentation level, starting from zero.

void _gmx_selelem_set_vtype	(	const gmx::SelectionTreeElementPointer &	sel,
		e_selvalue_t	vtype
	)

Sets the value type of a gmx::SelectionTreeElement.

Parameters

[in,out]	sel	Selection element to set the type for.
[in]	vtype	Value type for the selection element.

If the new type is GROUP_VALUE or POS_VALUE, the SEL_ALLOCDATA flag is also set.

This function should only be called at most once for each element, preferably right after calling _gmx_selelem_create().

const char* _gmx_selelem_type_str

(

const gmx::SelectionTreeElement &

sel

)

Returns a string representation of the type of a gmx::SelectionTreeElement.

Parameters

[in]

sel

Selection for which the string is requested

Returns

Pointer to a string that corresponds to sel->type.

The return value points to a string constant and should not be free'd.

The function returns NULL if sel->type is not one of the valid values.