Here is a list of all documented class members with links to the class documentation for each member:
- f -
- f
: gmx_ana_pos_t
, gmx::SelectionPosition
- FactoryMethod
: gmx::ICommandLineOptionsModule
- family()
: gmx::CpuInfo
- fbox_diag
: t_pbc
- fc
: t_oriresdata
- feature()
: gmx::CpuInfo
- Feature
: gmx::CpuInfo
- Features
: gmx::CpuInfo
- featureSet()
: gmx::CpuInfo
- featureString()
: gmx::CpuInfo
- fep_state
: t_state
, TpxFileHeader
- fepLambdaState()
: gmx::Awh
- FEPStateValue()
: FEPStateValue< T >
- fetchNextEvent()
: GpuRegionTimerWrapper< GpuRegionTimerImpl >
, GpuRegionTimerImpl
- file_version
: CheckpointHeaderContents
- filebase
: PreprocessResidue
, MoleculePatchDatabase
- fileExists()
: gmx::IFileInputRedirector
, gmx::test::TestFileInputRedirector
- fileGeneration
: TpxFileHeader
- fileIndex()
: gmx::EnergyTerm
- FileIOError()
: gmx::FileIOError
- fileManager()
: gmx::test::CommandLineTestBase
- FileNameOption()
: gmx::FileNameOption
- FileNameOptionInfo()
: gmx::FileNameOptionInfo
- FileNameOptionStorage
: gmx::FileNameOption
- filenames
: gmx::LegacyMdrunOptions
, gmx::LegacyInput
, t_filenm
- filetype()
: gmx::FileNameOption
- fileTypes()
: gmx::FileNameOptionInfo
- fileVersion
: TpxFileHeader
- fillFromInputFile()
: gmx::TopologyInformation
- FilteringExactTextMatch()
: gmx::test::FilteringExactTextMatch
- finalizeAnalysis()
: gmx::IEnergyAnalysis
- finalizeKineticContributions()
: ForeignLambdaTerms
- finalizePotentialContributions()
: ForeignLambdaTerms
- finalizeSignals()
: gmx::SimulationSignaller
- find()
: gmx_ga2la_t
, gmx::HashedMap< T >
- findBin()
: gmx::AnalysisHistogramSettings
- findEntryByName()
: StringTableBuilder
- findFile()
: gmx::DataFileFinder
- findFrame()
: gmx::EnergyTerm
- findHome()
: gmx_ga2la_t
- findNextLine()
: gmx::TextLineWrapper
- findNextPair()
: gmx::AnalysisNeighborhoodPairSearch
- findSubTopic()
: gmx::AbstractSimpleHelpTopic
, gmx::AbstractCompositeHelpTopic
, gmx::IHelpTopic
- finish()
: gmx::AbstractOptionStorage
, gmx::OptionsAssigner
, gmx::Options
, gmx::TrajectoryAnalysisModuleData
- finish_update()
: gmx::Update
- finishAnalysis()
: gmx::TrajectoryAnalysisModule
- finishContext()
: gmx::MessageStringCollector
- finishData()
: gmx::AnalysisData
, gmx::AnalysisDataHandle
- finishDataHandles()
: gmx::TrajectoryAnalysisModuleData
- finishDataStorage()
: gmx::AnalysisDataStorage
- finishFrame()
: gmx::AnalysisDataStorageFrame
, gmx::AnalysisDataStorage
, gmx::AnalysisDataHandle
- finishFrames()
: gmx::TrajectoryAnalysisModule
- finishFrameSerial()
: gmx::AnalysisDataStorage
, gmx::AnalysisData
, gmx::TrajectoryAnalysisModule
- finishOption()
: gmx::OptionsAssigner
- finishOutput()
: gmx::IMDOutputProvider
- finishPointSet()
: gmx::AnalysisDataStorageFrame
, gmx::AnalysisDataHandle
- finishSection()
: gmx::OptionsAssigner
- finishSet()
: gmx::AbstractOptionStorage
- firstColumn()
: gmx::test::AnalysisDataTestInputPointSet
, gmx::AnalysisDataPointSetRef
- firstEdge()
: gmx::AnalysisHistogramSettings
- firstLineIndent()
: gmx::TextLineWrapperSettings
- fitLocalAtomSet()
: t_oriresdata
- fitMasses()
: t_oriresdata
- flag
: t_filenm
- Flag
: gmx::IAnalysisDataModule
- flags
: t_matrix
, t_state
, gmx::IAnalysisDataModule
, gmx::AnalysisDataModuleSerial
, gmx::AnalysisDataModuleParallel
, gmx::AnalysisDataAverageModule
, gmx::AnalysisDataFrameAverageModule
, gmx::AnalysisDataDisplacementModule
, gmx::AnalysisDataSimpleHistogramModule
, gmx::AnalysisDataWeightedHistogramModule
, gmx::AnalysisDataBinAverageModule
, gmx::AnalysisDataLifetimeModule
, gmx::AbstractPlotModule
, gmx::TrajectoryAnalysisSettings
- flags_awhh
: CheckpointHeaderContents
- flags_dfh
: CheckpointHeaderContents
- flags_eks
: CheckpointHeaderContents
- flags_enh
: CheckpointHeaderContents
- flags_state
: CheckpointHeaderContents
- flagsPullHistory
: CheckpointHeaderContents
- FlagsTemplate()
: gmx::FlagsTemplate< FlagType >
- FloatingPointDifference()
: gmx::test::FloatingPointDifference
- FloatingPointTolerance()
: gmx::test::FloatingPointTolerance
- FloatOption()
: gmx::FloatOption
- FloatOptionInfo()
: gmx::FloatOptionInfo
- FloatOptionStorage
: gmx::FloatOption
- fn
: t_filenm
- force()
: gmx::ForceWithShiftForces
, gmx::OutputRequirements
, gmx::PotentialPointData
, gmx::ForceBuffersView
, gmx::ForceWithShiftForces
, gmx::CoulombCalculator< KernelCoulombType::RF >
, gmx::CoulombCalculator< KernelCoulombType::EwaldTabulated >
- force_
: gmx::ForceWithVirial
- forceAndCorrectionEnergy()
: gmx::CoulombCalculator< KernelCoulombType::EwaldAnalytical >
, gmx::CoulombCalculator< KernelCoulombType::EwaldTabulated >
, gmx::CoulombCalculator< KernelCoulombType::RF >
- forceBufferForDirectVirialContributions()
: ForceHelperBuffers
- ForceBuffers()
: gmx::ForceBuffers
- ForceBuffersView()
: gmx::ForceBuffersView
- forceC6C12()
: gmx::LennardJonesCalculator< false, InteractionModifiers::PotShift >
, gmx::LennardJonesCalculator< calculateEnergies, InteractionModifiers::ForceSwitch >
, gmx::LennardJonesCalculator< calculateEnergies, InteractionModifiers::PotSwitch >
, gmx::LennardJonesCalculator< true, InteractionModifiers::PotShift >
- forceGroups
: gmx::MtsLevel
- ForceHelperBuffers()
: ForceHelperBuffers
- forceMtsCombined()
: gmx::ForceBuffersView
- forceMtsCombinedWithPadding()
: gmx::ForceBuffersView
- ForceOutputs()
: gmx::ForceOutputs
- forceParam()
: InteractionOfType
- ForceProviderInput()
: gmx::ForceProviderInput
- ForceProviderOutput()
: gmx::ForceProviderOutput
- forceRec
: gmx::BenchmarkSystem
- forceRec_
: gmx::LegacyInput
- forces()
: gmx::Selection
- forceSigmaEpsilon()
: gmx::LennardJonesCalculator< calculateEnergies, InteractionModifiers::PotSwitch >
, gmx::LennardJonesCalculator< calculateEnergies, InteractionModifiers::ForceSwitch >
- forceWithPadding()
: gmx::ForceBuffersView
- ForceWithShiftForces()
: gmx::ForceWithShiftForces
- forceWithShiftForces()
: gmx::ForceOutputs
- ForceWithVirial()
: gmx::ForceWithVirial
- forceWithVirial()
: gmx::ForceOutputs
- forceWithVirial_
: gmx::ForceProviderOutput
- foreignLambdas()
: ForeignLambdaTerms
- foreignLambdaTerms
: gmx_enerdata_t
- ForeignLambdaTerms()
: ForeignLambdaTerms
- formatDescription()
: gmx::OptionInfo
- formatExtraDescription()
: gmx::AbstractOptionStorage
- formatIdentifier_
: gmx::MrcDensityMapHeader
- formatLine()
: gmx::TextLineWrapper
- formatRow()
: gmx::TextTableFormatter
- formatSingleValue()
: gmx::OptionStorageTemplate< T >
- fplog_
: gmx::SimulatorEnv
- fprog
: CheckpointHeaderContents
- frame()
: gmx::test::AnalysisDataTestInput
- frameCount()
: gmx::AnalysisDataStorage
, gmx::AnalysisData
, gmx::test::AnalysisDataTestInput
, gmx::AbstractAnalysisData
, gmx::AnalysisDataFrameAverageModule
, gmx::AnalysisDataWeightedHistogramModule
, gmx::AbstractAnalysisArrayData
, gmx::AnalysisDataSimpleHistogramModule
- frameFinished()
: gmx::AbstractPlotModule
, gmx::AnalysisDataModuleSerial
, gmx::AnalysisDataAverageModule
, gmx::AnalysisDataDisplacementModule
, gmx::AnalysisDataWeightedHistogramModule
, gmx::AnalysisDataLifetimeModule
, gmx::AnalysisDataModuleParallel
, gmx::AnalysisDataBinAverageModule
, gmx::AnalysisDataSimpleHistogramModule
, gmx::AnalysisDataFrameAverageModule
, gmx::IAnalysisDataModule
- frameFinishedSerial()
: gmx::IAnalysisDataModule
, gmx::AnalysisDataSimpleHistogramModule
, gmx::AnalysisDataModuleParallel
, gmx::AnalysisDataWeightedHistogramModule
- frameIndex()
: gmx::AnalysisDataPointSetRef
, gmx::AnalysisDataFrameRef
- frameStarted()
: gmx::AnalysisDataWeightedHistogramModule
, gmx::AnalysisDataModuleSerial
, gmx::AnalysisDataBinAverageModule
, gmx::AnalysisDataModuleParallel
, gmx::AnalysisDataFrameAverageModule
, gmx::AnalysisDataAverageModule
, gmx::AnalysisDataDisplacementModule
, gmx::AnalysisDataSimpleHistogramModule
, gmx::IAnalysisDataModule
, gmx::AnalysisDataLifetimeModule
, gmx::AbstractPlotModule
- frameTime
: gmx::OutputRequirements
- free()
: gmx::PageAlignedAllocationPolicy
, gmx::AlignedAllocationPolicy
, gmx::HostAllocationPolicy
- frflags()
: gmx::TrajectoryAnalysisSettings
- from()
: gmx::KeyValueTreeTransformRuleBuilder
- fromDefaultDir_
: gmx::DataFileInfo
- front()
: gmx::ListOfLists< typename >
, gmx::FixedCapacityVector< typename, size_t >
, gmx::ArrayRef< typename >
- ftime
: CheckpointHeaderContents
- ftp
: t_filenm
- fudgeQQ
: gmx_ffparams_t
- Fujitsu
: gmx::CpuInfo
- Fujitsu_HpcAce
: gmx::CpuInfo
- Full
: gmx::HardwareTopology
- fullBinaryPath()
: gmx::IProgramContext
, gmx::CommandLineProgramContext
- fullCleanUp()
: MoleculeInformation
- fullRange()
: gmx::RangePartitioning
- FullWithDevices
: gmx::HardwareTopology
- func
: gmx::HardwareTopology::Device
- function
: gmx::NumericalSplineTableInput
, gmx::AnalyticalSplineTableInput
- functionType
: InteractionListHandle
- functype
: gmx_ffparams_t
- fvir_prev
: t_state