- d -
- data()
: gmx::PaddedVector< T, Allocator >
, gmx::basic_mdspan< ElementType, Extents, LayoutPolicy, AccessorPolicy >
, gmx::FixedCapacityVector< typename, size_t >
, gmx::ArrayRef< typename >
, gmx::FixedCapacityVector< typename, size_t >
, gmx::EnumerationArray< EnumType, DataType, ArraySize >
- DataFileFinder()
: gmx::DataFileFinder
- DataFileInfo()
: gmx::DataFileInfo
- DataFileOptions()
: gmx::DataFileOptions
- dataFinished()
: gmx::AnalysisDataDisplacementModule
, gmx::AnalysisDataSimpleHistogramModule
, gmx::AnalysisDataWeightedHistogramModule
, gmx::AnalysisDataBinAverageModule
, gmx::AnalysisDataLifetimeModule
, gmx::AbstractPlotModule
, gmx::IAnalysisDataModule
, gmx::AnalysisDataModuleSerial
, gmx::AnalysisDataModuleParallel
, gmx::AnalysisDataAverageModule
, gmx::AnalysisDataFrameAverageModule
- dataHandle()
: gmx::TrajectoryAnalysisModuleData
- dataPropertyAboutToChange()
: gmx::AnalysisDataModuleManager
- datasetCount()
: gmx::TrajectoryAnalysisModule
- dataSetCount()
: gmx::test::AnalysisDataTestInput
, gmx::AbstractAnalysisData
- datasetFromIndex()
: gmx::TrajectoryAnalysisModule
- datasetFromName()
: gmx::TrajectoryAnalysisModule
- dataSetIndex()
: gmx::test::AnalysisDataTestInputPointSet
, gmx::AnalysisDataPointSetRef
- datasetNames()
: gmx::TrajectoryAnalysisModule
- dataStarted()
: gmx::IAnalysisDataModule
, gmx::AnalysisDataModuleSerial
, gmx::AnalysisDataAverageModule
, gmx::AnalysisDataFrameAverageModule
, gmx::AnalysisDataDisplacementModule
, gmx::AnalysisDataBinAverageModule
, gmx::AnalysisDataLifetimeModule
, gmx::AbstractPlotModule
- DDBalanceRegionHandler()
: DDBalanceRegionHandler
- deallocate()
: gmx::Allocator< T, AllocationPolicy >
- decay()
: gmx::accessor_basic< ElementType >
- decideIfCheckpointingThisStep()
: gmx::CheckpointHandler
- defaultBasename()
: gmx::FileNameOption
- defaultEnumIndex()
: gmx::StringOption
- defaultExtension()
: gmx::FileNameOptionInfo
- defaultFloatTolerance()
: gmx::test::FloatingPointTolerance
- defaultNiceLevel()
: gmx::CommandLineModuleSettings
- defaultRealTolerance()
: gmx::test::FloatingPointTolerance
- defaultSelectionText()
: gmx::SelectionOption
- defaultType()
: gmx::FileNameOption
- defaultValue()
: gmx::OptionTemplate< T, U >
, gmx::BooleanOptionInfo
- defaultValueIfSet()
: gmx::OptionTemplate< T, U >
- defaultValueIfSetExists()
: gmx::AbstractOptionStorage
- defaultValues()
: gmx::AbstractOptionStorage
, gmx::OptionStorageTemplate< T >
, gmx::OptionInfo
- defaultValuesAsStrings()
: gmx::OptionInfo
, gmx::AbstractOptionStorage
, gmx::OptionStorageTemplate< T >
- deform()
: gmx::Update
- deltaH()
: ForeignLambdaTerms
- densityDataCopy()
: gmx::MrcDensityMapOfFloatFromFileReader
- DensityFittingForce()
: gmx::DensityFittingForce
- DensitySimilarityMeasure()
: gmx::DensitySimilarityMeasure
- description()
: gmx::AbstractOptionStorage
, gmx::OptionTemplate< T, U >
- deserialize()
: gmx::ReadCheckpointDataHolder
- detect()
: gmx::CpuInfo
, gmx::HardwareTopology
- deviceIdsAssigned()
: gmx::GpuTaskAssignments
- deviceInfo()
: gmx::DeviceStreamManager
- DeviceStream()
: DeviceStream
- DeviceStreamManager()
: gmx::DeviceStreamManager
- didOutput()
: gmx::TextTableFormatter
- DirectoryEnumerator()
: gmx::DirectoryEnumerator
- disableInputOptionChecking()
: gmx::FileNameOptionManager
- disablePmeRanks()
: gmx::SeparatePmeRanksPermitted
- disableUnusedEntriesCheck()
: gmx::test::TestReferenceChecker
- discard()
: gmx::ThreeFry2x64General< rounds, internalCounterBits >
- dispatchFreeEnergyKernels()
: nonbonded_verlet_t
- dispatchNonbondedKernel()
: nonbonded_verlet_t
- dispatchPruneKernel()
: PairlistSets
- dispatchPruneKernelCpu()
: nonbonded_verlet_t
- dispatchPruneKernelGpu()
: nonbonded_verlet_t
- displayName()
: gmx::CommandLineProgramContext
, gmx::IProgramContext
- distance2()
: gmx::AnalysisNeighborhoodPair
- doBool()
: gmx::ISerializer
- doBoolArray()
: gmx::ISerializer
- doCheckpoint()
: ekinstate_t
, df_history_t
- doEnumArrayAsInt()
: gmx::ISerializer
- doEnumAsInt()
: gmx::ISerializer
- DomainDecompositionBuilder()
: gmx::DomainDecompositionBuilder
- doMembed()
: gmx::MembedHolder
- done()
: gmx::AbstractAverageHistogram
- dot()
: gmx::BasicVector< ValueType >
- DoubleOption()
: gmx::DoubleOption
- DoubleOptionInfo()
: gmx::DoubleOptionInfo
- DTensorsTimeAveragedHistory()
: t_oriresdata
- dump()
: gmx::ReadCheckpointDataHolder
- dx()
: gmx::AnalysisDataFrameRef
, gmx::test::AnalysisDataTestInputFrame
, gmx::AnalysisDataFrameHeader
, gmx::AnalysisDataPointSetRef
, gmx::AnalysisNeighborhoodPair
- dy()
: gmx::AnalysisDataPointSetRef
, gmx::AnalysisDataFrameRef
- dynamicMask()
: gmx::SelectionOption