Here is a list of all documented class members with links to the class documentation for each member:
- a -
- a()
: gmx::UniformIntDistribution< IntType >::param_type
, gmx::UniformIntDistribution< IntType >
, gmx::UniformRealDistribution< RealType >
, gmx::UniformRealDistribution< RealType >::param_type
- AbstractAnalysisArrayData()
: gmx::AbstractAnalysisArrayData
- AbstractAverageHistogram()
: gmx::AbstractAverageHistogram
- accum_m
: df_history_t
- accum_m2
: df_history_t
- accum_p
: df_history_t
- accum_p2
: df_history_t
- accumulate()
: ForeignLambdaTerms
- addAndCheckGuarantee()
: gmx::ProcessFrameConversion
- addColumnModule()
: gmx::AbstractAnalysisData
- addCurrentExceptionAsNested()
: gmx::ExceptionInitializer
- addDefaultFileNameOption()
: gmx::FileNameOptionManager
- addEntry()
: t_state
- addError()
: WarningHandler
- addFrameConverter()
: gmx::ProcessFrameConversion
- addGroup()
: gmx::AbstractOptionSectionHandle
, gmx::IOptionsContainer
, gmx::Options
- addManager()
: gmx::Options
- addModule()
: gmx::AbstractAnalysisData
- addNested()
: gmx::ExceptionInitializer
- addNote()
: WarningHandler
- addOption()
: gmx::IOptionsContainer
- addOptionImpl()
: gmx::IOptionsContainer
- addOptionsBehavior()
: gmx::ICommandLineOptionsModuleSettings
- addSection()
: gmx::IOptionsContainerWithSections
- addSectionImpl()
: gmx::IOptionsContainerWithSections
- addTimeUnitOption()
: gmx::TimeUnitBehavior
- addWarning()
: WarningHandler
- allocateValues()
: gmx::AbstractAnalysisArrayData
- allowedValues()
: gmx::StringOptionInfo
, gmx::EnumOptionInfo
- allowEmpty()
: gmx::SelectionOption
- allowMissing()
: gmx::FileNameOption
, gmx::FileNameOptionInfo
- allowMultiple()
: gmx::OptionTemplate< T, U >
- allowPositionalArguments()
: gmx::CommandLineParser
- allPresent()
: gmx::AnalysisDataPointSetRef
, gmx::AnalysisDataFrameRef
- alpha()
: gmx::GammaDistribution< RealType >::param_type
, gmx::GammaDistribution< RealType >
- altloc()
: PdbAtomEntry
- AlwaysAtomSelections
: gmx::SelectionCollection
- AnalysisArrayData()
: gmx::AnalysisArrayData
- AnalysisData()
: gmx::AnalysisData
- AnalysisDataBinAverageModule()
: gmx::AnalysisDataBinAverageModule
- AnalysisDataFrameHeader()
: gmx::AnalysisDataFrameHeader
- AnalysisDataFrameRef()
: gmx::AnalysisDataFrameRef
- AnalysisDataHandle()
: gmx::AnalysisDataHandle
- AnalysisDataPlotModule()
: gmx::AnalysisDataPlotModule
- AnalysisDataPlotSettings()
: gmx::AnalysisDataPlotSettings
- AnalysisDataPointSetRef()
: gmx::AnalysisDataPointSetRef
- AnalysisDataSimpleHistogramModule()
: gmx::AnalysisDataSimpleHistogramModule
- AnalysisDataValue()
: gmx::AnalysisDataValue
- AnalysisDataVectorPlotModule()
: gmx::AnalysisDataVectorPlotModule
- AnalysisDataWeightedHistogramModule()
: gmx::AnalysisDataWeightedHistogramModule
- AnalysisHistogramSettings()
: gmx::AnalysisHistogramSettings
- AnalysisHistogramSettingsInitializer()
: gmx::AnalysisHistogramSettingsInitializer
- AnalysisNeighborhood()
: gmx::AnalysisNeighborhood
- AnalysisNeighborhoodPair()
: gmx::AnalysisNeighborhoodPair
- AnalysisNeighborhoodPairSearch()
: gmx::AnalysisNeighborhoodPairSearch
- AnalysisNeighborhoodPositions()
: gmx::AnalysisNeighborhoodPositions
- AnalysisNeighborhoodSearch()
: gmx::AnalysisNeighborhoodSearch
- analyzeFrame()
: gmx::TrajectoryAnalysisModule
- anisotropy()
: PdbAtomEntry
- APIError()
: gmx::APIError
- appendBlock()
: gmx::RangePartitioning
- appendLegend()
: gmx::AbstractPlotModule
- appendListOfLists()
: gmx::ListOfLists< typename >
- applyModule()
: gmx::AbstractAnalysisData
- ArrayRef()
: gmx::ArrayRef< typename >
- arrayRefFromArray()
: gmx::ArrayRef< typename >
- ArrayRefWithPadding()
: gmx::ArrayRefWithPadding< typename >
- arrayRefWithPadding()
: gmx::PaddedVector< T, Allocator >
- ArrayRefWithPadding()
: gmx::ArrayRefWithPadding< typename >
- as_vec()
: gmx::BasicVector< ValueType >
- at()
: gmx::FixedCapacityVector< typename, size_t >
, StringTable
, gmx::ListOfLists< typename >
, gmx::FixedCapacityVector< typename, size_t >
, gmx::ArrayRef< typename >
- atnr
: gmx_ffparams_t
- atom()
: AtomProxy
- atomCount()
: gmx::Selection
, gmx::SelectionPosition
- atomDensity
: Nbnxm::Grid::Dimensions
- atomIndices()
: gmx::Selection
, gmx::SelectionPosition
- atomInfoAllVdw
: gmx::BenchmarkSystem
- atomInfoOxygenVdw
: gmx::BenchmarkSystem
- AtomIterator()
: AtomIterator
- atomName()
: PdbAtomEntry
, AtomProxy
- atomnumber()
: SimulationParticle
- atomNumberFromElement()
: AtomProperties
- atomNumberInMol()
: AtomProxy
- AtomProperties()
: AtomProperties
- AtomProxy()
: AtomProxy
- AtomRange()
: AtomRange
- atoms
: gmx::OutputRequirements
, gmx_moltype_t
- atomSerialNumber()
: PdbAtomEntry
- atomTypes
: gmx::BenchmarkSystem
- average()
: gmx::AnalysisDataAverageModule
- averageMCycles()
: nbnxn_cycle_t
- averager()
: gmx::AnalysisDataWeightedHistogramModule
, gmx::AnalysisDataSimpleHistogramModule
- awhHistory
: t_state
- axis_x
: t_matrix
- axis_y
: t_matrix