.. _gmx rmsf: gmx rmsf ======== Synopsis -------- .. parsed-literal:: gmx rmsf [:strong:`-f` :emphasis:`[<.xtc/.trr/...>]`] [:strong:`-s` :emphasis:`[<.tpr/.gro/...>]`] [:strong:`-n` :emphasis:`[<.ndx>]`] [:strong:`-q` :emphasis:`[<.pdb>]`] [:strong:`-oq` :emphasis:`[<.pdb>]`] [:strong:`-ox` :emphasis:`[<.pdb>]`] [:strong:`-o` :emphasis:`[<.xvg>]`] [:strong:`-od` :emphasis:`[<.xvg>]`] [:strong:`-oc` :emphasis:`[<.xvg>]`] [:strong:`-dir` :emphasis:`[<.log>]`] [:strong:`-b` :emphasis:`