Here is a list of all documented class members with links to the class documentation for each member:
- t -
- t
: gmx::AnalysisDataDisplacementModule::Impl
, CheckpointHeaderContents
, gmx_kernel_timing_data_t
- t0
: gmx::AnalysisDataDisplacementModule::Impl
- t_
: gmx::ForceProviderInput
- T_abs
: gmx::IMDEnergyBlock
- t_methoddata_kweval()
: t_methoddata_kweval
- tablesOffsets
: PmeGpuGridParams
- tableSpacing()
: gmx::CubicSplineTable
, gmx::QuadraticSplineTable
- TabulatedNormalDistribution()
: gmx::TabulatedNormalDistribution< RealType, tableBits >
- target()
: gmx::PointState
- targetbinsize
: t_methoddata_insolidangle
- task
: gmx::Lincs
- task_
: gmx::GpuTaskMapping
- tau
: anonymous_namespace{edsam.cpp}::t_edflood
, t_UmbrellaWindow
- tausmooth
: t_UmbrellaWindow
- tbin
: t_methoddata_insolidangle
- tbinsize
: t_methoddata_insolidangle
- teardown()
: gmx::PmeLoadBalanceHelper
- temp
: gmx_repl_ex
- temperatureCouplingScheme
: gmx::test::anonymous_namespace{energyoutput.cpp}::EnergyOutputTestParameters
- temperatureScaleFactor
: gmx::BiasParams
- tensors()
: gmx::CorrelationGrid
- tensorSize()
: gmx::CorrelationGrid
- terminatable
: gmx::ImdOptions
- TerminationHelper()
: gmx::test::TerminationHelper
- termMagnitude()
: gmx::test::FloatingPointDifference
- test()
: gmx::FlagsTemplate< FlagType >
- testAgainstAnalyticalSolution()
: gmx::test::anonymous_namespace{leapfrog.cpp}::LeapFrogTest
- testAgainstReferenceData()
: gmx::test::anonymous_namespace{leapfrog.cpp}::LeapFrogTest
- testData()
: gmx::test::XvgMatch
- TestException()
: gmx::test::TestException
- TestFileManager()
: gmx::test::TestFileManager
- testFilesEqual()
: gmx::test::StringTestBase
- TestHardwareContext()
: gmx::test::TestHardwareContext
- testIndex()
: gmx::AnalysisNeighborhoodPair
- TestProgramContext()
: gmx::test::anonymous_namespace{testinit.cpp}::TestProgramContext
- TestReferenceChecker()
: gmx::test::TestReferenceChecker
- TestReferenceData
: gmx::test::TestReferenceChecker
, gmx::test::TestReferenceData
- TestReferenceDataImpl()
: gmx::test::internal::TestReferenceDataImpl
- testSplineTableAgainstFunctions()
: gmx::test::anonymous_namespace{splinetable.cpp}::SplineTableTest< T >
- testWithRequirements()
: gmx::test::TrajectoryFrameWriterTest
- testWriteHelp()
: gmx::test::CommandLineTestBase
- text()
: gmx::anonymous_namespace{exceptions.cpp}::ErrorMessage
- TextFileMatch()
: gmx::test::TextFileMatch
- textForNextLine()
: gmx::TextTableFormatter::Impl::ColumnData
- TextInputFile()
: gmx::TextInputFile
- TextLineWrapper
: gmx::TextLineWrapperSettings
, gmx::TextLineWrapper
- TextLineWrapperSettings()
: gmx::TextLineWrapperSettings
- TextOutputFile()
: gmx::TextOutputFile
- TextReader()
: gmx::TextReader
- TextTableFormatter()
: gmx::TextTableFormatter
- TextWriter()
: gmx::TextWriter
- therm_integral
: t_state
- thermostatIntegral()
: gmx::VRescaleThermostat
- this_extent
: gmx::detail::extents_analyse< R, dynamic_extent, StaticExtents...>
- thisRankHasAnyGpuTask()
: gmx::GpuTaskAssignments
- thisRankHasPmeGpuTask()
: gmx::GpuTaskAssignments
- ThisRankWillDoIO
: gmx::Bias
- threadAffinity
: gmx_hw_opt_t
- ThreeFry2x64()
: gmx::ThreeFry2x64< internalCounterBits >
- ThreeFry2x64Fast()
: gmx::ThreeFry2x64Fast< internalCounterBits >
- ThreeFry2x64General()
: gmx::ThreeFry2x64General< rounds, internalCounterBits >
- throwIfNotFound()
: gmx::DataFileOptions
- ThrowLocation()
: gmx::ThrowLocation
- Tij
: df_history_t
- Tij_empirical
: df_history_t
- time()
: gmx::TrajectoryFrame
- Time
: gmx::CorrelationGrid
- time_
: gmx::test::anonymous_namespace{energyoutput.cpp}::EnergyOutputTest
- TimeOptionScaler()
: gmx::anonymous_namespace{timeunitmanager.cpp}::TimeOptionScaler< FloatingPointOptionInfo >
- timePerFrameIsSet
: gmx_tng_trajectory
- timers
: gmx_nbnxn_cuda_t
, gmx_nbnxn_ocl_t
- timeScaleFactor()
: gmx::TimeUnitManager
- timestep
: gmx::test::anonymous_namespace{leapfrog.cpp}::LeapFrogTestParameters
- timeStepValue
: gmx::OutputRequirements
- timeUnit
: gmx::TrajectoryAnalysisSettings::Impl
, gmx::AnalysisDataPlotSettings
, gmx::TimeUnitManager
, gmx::TimeUnitBehavior
, gmx::TrajectoryAnalysisSettings
- timeUnitAsString()
: gmx::TimeUnitManager
- TimeUnitManager()
: gmx::TimeUnitManager
- timeValue()
: gmx::DoubleOption
, gmx::FloatOption
- timing
: gmx_wallclock_gpu_pme_t
- timingEvents
: PmeGpuSpecific
- timingOptions
: gmx::MdrunOptions
- timings
: gmx_nbnxn_cuda_t
, gmx_nbnxn_ocl_t
- title
: t_matrix
, gmx::anonymous_namespace{cmdlinehelpmodule.cpp}::RootHelpTopic
, gmx::anonymous_namespace{cmdlinehelpmodule.cpp}::CommandsHelpTopic
, gmx::anonymous_namespace{cmdlinehelpmodule.cpp}::ModuleHelpTopic
, gmx::CommandLineModuleGroupData
, gmx::TextTableFormatter::Impl::ColumnData
, gmx::AbstractSimpleHelpTopic
, gmx::AbstractCompositeHelpTopic
, gmx::SimpleHelpTopic< HelpText >
, gmx::CompositeHelpTopic< HelpText >
, gmx::IHelpTopic
, gmx::anonymous_namespace{selhelp.cpp}::KeywordDetailsHelpTopic
- title_
: gmx::TextTableFormatter::Impl::ColumnData
- tmass
: t_mdatoms
- tmass_
: gmx::test::anonymous_namespace{energyoutput.cpp}::EnergyOutputTest
- tmassA
: t_mdatoms
- tmassB
: t_mdatoms
- tmax
: gmx::AnalysisDataDisplacementModule::Impl
- tmpFrameAtoms_
: gmx::PositionCalculationCollection::Impl
- tmpv
: gmx::Lincs
- tng
: gmx_tng_trajectory
- to()
: gmx::KeyValueTreeTransformRuleBuilder::AfterFrom< FromType >
- toArrayRef()
: gmx::MultiDimArray< TContainer, Extents, LayoutPolicy >
- toDVec()
: gmx::BasicVector< ValueType >
- toIVec()
: gmx::BasicVector< ValueType >
- tolerance()
: gmx::test::XvgMatch
- Tolerance
: t_UmbrellaOptions
- tolerance()
: gmx::test::ConfMatch
- tolerance_
: gmx::anonymous_namespace{shake.cpp}::ShakeTest
- ToleranceError()
: gmx::ToleranceError
- tolerances_
: gmx::test::TrajectoryComparison
- toObject()
: gmx::KeyValueTreeTransformRuleBuilder::AfterFrom< FromType >
- ToObject()
: gmx::KeyValueTreeTransformRuleBuilder::ToObject< FromType >
- toOptionName()
: gmx::CommandLineParser::Impl
- top
: anonymous_namespace{minimize.cpp}::EnergyEvaluator
, gmx_sel_evaluate_t
, gmx_ana_selcollection_t
, gmx::SelMethodEvalContext
- top_
: gmx::PositionCalculationCollection::Impl
- top_global
: gmx::ISimulator
, anonymous_namespace{minimize.cpp}::EnergyEvaluator
- TopicStack
: gmx::HelpManager::Impl
- topicStack_
: gmx::HelpManager::Impl
- topManager_
: anonymous_namespace{indexutil.cpp}::IndexBlockTest
- Topology
: gmx::PositionCalculationCollection
- topology()
: gmx::test::TopologyManager
, gmx::SelectionTopologyProperties
- TopologyAndMasses
: gmx::PositionCalculationCollection
- TopologyHolder()
: gmx::TopologyHolder
- topologyInformation()
: gmx::TrajectoryAnalysisRunnerCommon
- topologyProvider()
: gmx::TrajectoryAnalysisRunnerCommon
- torque_v
: gmx_enfrotgrp
- toRVec()
: gmx::BasicVector< ValueType >
- toString()
: gmx::test::FloatingPointDifference
, gmx::MessageStringCollector
, gmx::StringOutputStream
, gmx::test::CommandLine
, gmx::test::FloatingPointTolerance
, gmx::KeyValueTreePath
- totalVirial()
: gmx::EnergyElement
- totalVirial_
: gmx::test::anonymous_namespace{energyoutput.cpp}::EnergyOutputTest
- totNumThreadsIsAuto
: gmx_hw_opt_t
- toType()
: gmx::OptionInfo
- ToValue()
: gmx::KeyValueTreeTransformRuleBuilder::ToValue< FromType, ToType >
- tp
: MoleculePatch
- TprAndFileManager()
: gmx::test::TprAndFileManager
- tprName()
: gmx::test::TprAndFileManager
- TrajectoryAnalysisModule()
: gmx::TrajectoryAnalysisModule
- TrajectoryAnalysisModuleData()
: gmx::TrajectoryAnalysisModuleData
, gmx::TrajectoryAnalysisModule
- TrajectoryAnalysisModuleDataBasic()
: gmx::anonymous_namespace{analysismodule.cpp}::TrajectoryAnalysisModuleDataBasic
- TrajectoryAnalysisRunnerCommon()
: gmx::TrajectoryAnalysisRunnerCommon
, gmx::TopologyInformation
- TrajectoryAnalysisSettings()
: gmx::TrajectoryAnalysisSettings
- TrajectoryComparison()
: gmx::test::TrajectoryComparison
- TrajectoryFileOpener()
: gmx::TrajectoryFileOpener
- TrajectoryFrame()
: gmx::TrajectoryFrame
- TrajectoryFrameReader()
: gmx::test::TrajectoryFrameReader
- trajectoryMatchSettings
: gmx::test::anonymous_namespace{rerun.cpp}::MdrunRerunTest
- trajectoryWriterSetup()
: gmx::ITrajectoryWriterClient
- trajectoryWriterTeardown()
: gmx::ITrajectoryWriterClient
- transferKind
: PmeGpuSettings
- transformationToDensityLattice()
: gmx::MrcDensityMapOfFloatFromFileReader
, gmx::anonymous_namespace{densityfitting.cpp}::DensityFittingSimulationParameterSetup
- transformWith()
: gmx::KeyValueTreeTransformRuleBuilder::ToObject< FromType >
, gmx::KeyValueTreeTransformRuleBuilder::ToValue< FromType, ToType >
- TranslateAndScale()
: gmx::TranslateAndScale
- translation_
: gmx::MrcDensitySkewData
- tri_bits
: gmx::Task
- triangle
: gmx::Task
- tric_shift
: t_pbc
- tric_vec
: t_pbc
- trimLeadingWhiteSpace_
: gmx::TextReader::Impl
- trimTrailingComment_
: gmx::TextReader::Impl
- trimTrailingWhiteSpace_
: gmx::TextReader::Impl
- tryCast()
: gmx::Any
- tryCastRef()
: gmx::Any
- tryConnect()
: gmx::ImdSession::Impl
- tryGetDataFrame()
: gmx::AnalysisDataStorage
, gmx::AbstractAnalysisData
- tryGetDataFrameInternal()
: gmx::AbstractAnalysisData
- tryStartOption()
: gmx::OptionsAssigner
- tstep
: gmx::IMDEnergyBlock
- tunePme
: gmx::MdrunOptions
- two_k_rf
: cu_nbparam
, cl_nbparam_params
, cl_nbparam
- type()
: gmx::SelectionParserSymbol
, gmx::Selection
, gmx_repl_ex
, BondedInteractionList
, gmx::SelectionParserValue
, gmx::internal::SelectionData
, MoleculePatch
, gmx_ana_indexmap_t
, gmx::Any
, gmx_ana_selmethod_t
, gmx::SelectionTreeElement
, gmx::SelectionPosition
, gmx_ana_poscalc_t
, t_pargs
, gmx::registerMdModuleNotification<>
, gmx::registerMdModuleNotification< CurrentCallParameter, CallParameter...>
, gmx::OptionInfo
, gmx::SelectionTreeElement
, gmx_molblock_t
, t_methoddata_pos
, gmx_ana_selvalue_t
, gmx::IMDHeader
- type_
: gmx::SelectionParserSymbol::Impl
- typeA
: t_mdatoms
- typeB
: t_mdatoms
- typeEnumValues
: gmx::PositionCalculationCollection
- typeFromEnum()
: gmx::PositionCalculationCollection
- typeString()
: gmx::FloatOptionStorage
, gmx::AbstractOptionStorage
, gmx::FileNameOptionStorage
, gmx::StringOptionStorage
, gmx::IntegerOptionStorage
, anonymous_namespace{abstractoptionstorage.cpp}::MockOptionStorage
, gmx::OptionStorageTemplate< T >
, gmx::BooleanOptionStorage
, gmx::SelectionFileOptionStorage
, gmx::SelectionOptionStorage
, gmx::Int64OptionStorage
, gmx::EnumOptionStorage
, gmx::DoubleOptionStorage