- a -
- a
: gmx_specatsend_t
, BondedInteraction
, MoleculePatch
- a_fmax
: em_state_t
- aa
: gmx::analysismodules::anonymous_namespace{sasa.cpp}::t_conect
- ab
: gmx::analysismodules::anonymous_namespace{sasa.cpp}::t_conect
- absTol
: gmx::test::SimdMathTest::CompareSettings
- absTol_
: gmx::test::SimdBaseTest
- accum_m
: df_history_t
- accum_m2
: df_history_t
- accum_p
: df_history_t
- accum_p2
: df_history_t
- accumulator_
: gmx::AnalysisDataSimpleHistogramModule::Impl
, gmx::AnalysisDataWeightedHistogramModule::Impl
- active_
: gmx::DensityFittingParameters
- activeTimers
: PmeGpuSpecific
- acTrestart
: t_UmbrellaOptions
- adaptiveForceConstantScale_
: gmx::DensityFittingForceProviderState
- adaptiveForceScaling_
: gmx::DensityFittingParameters
- adaptiveForceScalingTimeConstant_
: gmx::DensityFittingParameters
- adress_bits
: gmx_device_info_t
- algorithms_
: gmx::test::anonymous_namespace{constr.cpp}::ConstraintsTest
- allswaps
: gmx_repl_ex
- alpha2
: anonymous_namespace{edsam.cpp}::t_edflood
- amplitude_
: gmx::GaussianSpreadKernelParameters::PositionAndAmplitude
- amplitudeLookupMethod_
: gmx::DensityFittingParameters
- analysisDatasets_
: gmx::TrajectoryAnalysisModule::Impl
- angcut
: t_methoddata_insolidangle
- angle
: VirtualSiteTopology
- angle_v
: gmx_enfrotgrp
- angles
: AllVsiteBondedInteractions
- apm
: swap_group
- appendingBehavior
: gmx::MdrunOptions
- appendOption
: gmx::LegacyMdrunOptions
- archSpecific
: PmeGpu
- arith
: gmx::SelectionTreeElement
- as
: t_methoddata_same
- as_s_sorted
: t_methoddata_same
- assigner_
: gmx::CommandLineParser::Impl
- associativity
: gmx::HardwareTopology::Cache
- at_end
: gmx_domdec_specat_comm_t
- at_start
: gmx_domdec_specat_comm_t
- atdat
: gmx_nbnxn_cuda_t
, Nbnxm::gpu_timers_t
, gmx_nbnxn_ocl_t
- atf
: gmx::Lincs
- atnr
: gmx_ffparams_t
- atom
: PreprocessResidue
, MoleculePatch
, AtomIndex
- atom1
: VirtualSiteTopology::VirtualSiteBond
, VirtualSiteTopology::VirtualSiteAngle
- atom2
: VirtualSiteTopology::VirtualSiteBond
, VirtualSiteTopology::VirtualSiteAngle
- atom3
: VirtualSiteTopology::VirtualSiteAngle
- atom_types
: cu_atomdata
, cl_atomdata
- atomAreas_
: gmx::analysismodules::anonymous_namespace{sasa.cpp}::SasaModuleData
- atomGroups
: AtomDistribution::DomainAtomGroups
, AtomDistribution
- atomIndex
: InterdependentTask
- atomIndices
: Nbnxm::GridSetData
, gmx_nbnxn_cuda_t
- atomIndicesSize
: gmx_nbnxn_cuda_t
- atomIndicesSize_alloc
: gmx_nbnxn_cuda_t
- atomInfoAllVdw
: gmx::BenchmarkSystem
- atomInfoOxygenVdw
: gmx::BenchmarkSystem
- atomName
: BaseEntry
- atomname
: PreprocessResidue
- atomNumber
: gmx::ExclusionBlock
- atoms
: PmeGpuKernelParamsBase
, gmx_moltype_t
, gmx::OutputRequirements
, MoleculeInformation
, gmx::Lincs
- atomset
: swap_group
- atomSet
: pull_group_work_t
, gmx_enfrotgrp
- atomSetData_
: gmx::LocalAtomSetManager::Impl
- atomtype
: VirtualSiteConfiguration
- atomTypes
: gmx::BenchmarkSystem
- atomtypes
: gmx_localtop_t
- aver
: t_UmbrellaWindow
- averager_
: gmx::internal::BasicHistogramImpl
- awhBiasParams
: gmx::test::AwhTestParameters
- awhDimParams
: gmx::test::AwhTestParameters
- awhHistory
: t_state
- awhParams
: gmx::test::AwhTestParameters
- axis_x
: t_matrix
- axis_y
: t_matrix