- b -
- b
: t_pargs
, BondedInteractionList
, gmx_ana_poscalc_t
, gmx_ana_selvalue_t
, gmx_ana_indexmap_t
- b0
: gmx::Task
- b1
: gmx::Task
- bAcceptBooleanNoPrefix_
: gmx::OptionsAssigner::Impl
- bAllowMissing_
: gmx::AnalysisDataModuleManager::Impl
- bAllowPositionalArguments_
: gmx::CommandLineParser::Impl
- bAllowReduceIact
: UmbrellaOptions
- bAlreadyPresent
: MoleculePatch
- baros_integral
: t_state
- baseid
: gmx_ana_poscalc_t
- baseLatency
: gmx::HardwareTopology::Numa
- bAuto
: UmbrellaOptions
- bb
: NbnxnPairlistCpuWork::IClusterData
- bBoolNo
: gmx_sel_lexer_t
- bBox
: TpxFileHeader
- bBuffer
: gmx_sel_lexer_t
- bc
: dd_corners_t
- bCalcTauInt
: UmbrellaOptions
- bCmdStart
: gmx_sel_lexer_t
- bCommIter
: gmx::Lincs
- bConnected
: gmx::ImdSession::Impl
- bConstForce
: anonymous_namespace{edsam.cpp}::t_edflood
- bContrib
: t_UmbrellaWindow
- bcr1
: dd_corners_t
- bCumulative_
: gmx::AnalysisDataLifetimeModule::Impl
- bCycl
: UmbrellaOptions
- bDataProperty_
: gmx::AnalysisDataModuleManager::Impl
- bDiscrete
: t_matrix
- bDoTime
: NbnxmGpu
- bDynamicBox
: nbnxn_atomdata_t
- bEquil
: df_history_t
- beta
: gmx::DimParams::FepDimParams
, gmx::test::AwhTestParameters
- betak
: gmx::DimParams::PullDimParams
- bEval
: gmx_ana_poscalc_t
- bExternalGroupsSet_
: gmx::SelectionCollection::Impl
- bExternalPotentialProviderHasBeenRegistered
: pull_coord_work_t
- bF
: TpxFileHeader
- bFirst
: gmx::AnalysisDataDisplacementModule::Impl
- bFirstRow_
: gmx::TextTableFormatter::Impl
- bForceActivated
: gmx::ImdSession::Impl
- bFromDefaultDir
: gmx::DataFileInfo
- bGenerateHH14Interactions
: PreprocessResidue
- bGroups
: gmx_sel_lexer_t
- bHarmonic
: anonymous_namespace{edsam.cpp}::t_edflood
- bHelix
: t_bb
- bHidden_
: gmx::CommandLineHelpContext::Impl
- bHistOnly
: UmbrellaOptions
- bhost_UNUSED
: CheckpointHeaderContents
- bias_
: gmx::BiasCoupledToSystem
, gmx::test::BiasTest
, gmx::test::BiasFepLambdaStateTest
- biasIndex
: gmx::BiasParams
- biasState_
: gmx::test::BiasStateTest
- bin
: t_partition_item
, methoddata_insolidangle
- binaryName_
: gmx::CommandLineModuleManager::Impl
- bInit_
: gmx::PositionCalculationCollection::Impl
- bInitPotByIntegration
: UmbrellaOptions
- bInputCheckingDisabled_
: gmx::FileNameOptionManager::Impl
- bins
: UmbrellaOptions
- bInUse_
: gmx::test::internal::TestReferenceDataImpl
- bIr
: TpxFileHeader
- bKeepAllGeneratedDihedrals
: PreprocessResidue
- blbnb
: gmx::Lincs
- blc
: gmx::Lincs
- blc1
: gmx::Lincs
- bllen
: gmx::Lincs
- bllen0
: gmx::Lincs
- blmf
: gmx::Lincs
- blmf1
: gmx::Lincs
- blnr
: gmx::Lincs
- blocka_
: anonymous_namespace{indexutil.cpp}::IndexBlockTest
- blockIndex
: MolecularTopologyAtomIndices
- blockLengthMeasure
: gmx::CorrelationGrid
- blockSize
: KernelLaunchConfig
- blockstack
: gmx_sel_mempool_t
- blockstack_nalloc
: gmx_sel_mempool_t
- blockSumWeightX
: gmx::CorrelationBlockData::CoordData
- bLog
: UmbrellaOptions
- bMatchBool
: gmx_sel_lexer_t
- bMatchOf
: gmx_sel_lexer_t
- bMultipoint_
: gmx::AbstractAnalysisData::Impl
- bNewForces
: gmx::ImdSession::Impl
- bNonLocalStreamDoneMarked
: NbnxmGpu
- bNPT
: gmx_repl_ex
- body
: PartialDeserializedTprFile
- bond
: VirtualSiteTopology
- bonds
: AllVsiteBondedInteractions
- boolt
: gmx::SelectionTreeElement
- bOrires
: t_mdatoms
- bOut
: gmx_enfrot
- box
: gmx::OutputRequirements
, gmx_pme_comm_n_box_t
, t_state
, gmx::BenchmarkSystem
, t_pbc
, gmx::test::TrajectoryTolerances
- box_
: gmx::test::anonymous_namespace{energyoutput.cpp}::EnergyOutputTest
, gmx::ForceProviderInput
- box_rel
: t_state
- boxOutputInterval
: gmx_tng_trajectory
- boxScaler
: PmeShared
- boxv
: gmx::PTCouplingArrays
, t_state
- boxVolume
: PmeGpuDynamicParams
- boxXX
: PbcAiuc
- boxYX
: PbcAiuc
- boxYY
: PbcAiuc
- boxZX
: PbcAiuc
- boxZY
: PbcAiuc
- boxZZ
: PbcAiuc
- bParallel
: gmx::AnalysisDataModuleManager::Impl::ModuleInfo
- bParallelModules_
: gmx::AnalysisDataModuleManager::Impl
- bPBC
: t_methoddata_pos
, gmx::TrajectoryAnalysisSettings::Impl
- bPerturbed
: t_mdatoms
- bPrefetchLjParam
: NbnxmGpu
- bPrintCOM
: t_UmbrellaHeader
- bPrintComp
: t_UmbrellaHeader
- bPrintHeader_
: gmx::TextTableFormatter::Impl
- bPrintRefValue
: t_UmbrellaHeader
- bProcessed
: MoleculeInformation
- bProf0Set
: UmbrellaOptions
- bPullx
: UmbrellaOptions
- bQuiet_
: gmx::CommandLineModuleManager::Impl
- bRemoveDihedralIfWithImproper
: PreprocessResidue
- bRmPBC
: gmx::TrajectoryAnalysisSettings::Impl
- bSelfTestMode_
: gmx::test::internal::TestReferenceDataImpl
, gmx::test::TestReferenceChecker::Impl
- bSerialModules_
: gmx::AnalysisDataModuleManager::Impl
- bSet
: t_pargs
, t_nbparam
- bSkipUnknown_
: gmx::CommandLineParser::Impl
- bSorted
: t_methoddata_same
- bSourceLayout
: gmx::InstallationPrefixInfo
- bsp_mod
: PmeShared
- bsSeed
: UmbrellaOptions
- bStatic
: gmx_ana_indexmap_t
- bsWeight
: t_UmbrellaWindow
- bSym
: UmbrellaOptions
- bTakeComplement
: gmx_help_make_index_group
- bTaskDep
: gmx::Lincs
- bTaskDepTri
: gmx::Lincs
- bTerminatable
: gmx::ImdSession::Impl
- bTerminated
: gmx::ImdSession::Impl
- btime_UNUSED
: CheckpointHeaderContents
- bTop
: TpxFileHeader
- buf
: t_symbuf
- buffer
: gmx_sel_mempool_t
, gmx_sel_lexer_t
- buffer_flags
: nbnxn_atomdata_t
, PairsearchWork
- bufsize
: gmx_enfrot
, t_symbuf
- bugs_
: gmx::CommandLineHelpWriter::Impl
- builder
: gmx::test::anonymous_namespace{observablesreducer.cpp}::ObservablesReducerIntegrationTest::RankData
- builder_
: gmx::KeyValueTreeTransformRuleBuilder::Base
, gmx::MDModulesWriteCheckpointData
- builders_
: gmx::internal::AnalysisDataStorageImpl
- buildHasBeenCalled_
: gmx::ObservablesReducerBuilder::Impl
- bUpToDate
: ekinstate_t
- bus
: gmx::HardwareTopology::Device
- bUse
: t_coordselection
- bUseBufferFlags
: nbnxn_atomdata_t
- buser_UNUSED
: CheckpointHeaderContents
- bUseTwoStreams
: NbnxmGpu
- bV
: TpxFileHeader
- bVCMgrps
: t_mdatoms
- bWarned
: AtomProperties::Impl
- bWarnVDW
: AtomProperties::Impl
- bWConnect
: gmx::ImdSession::Impl
- bWrap_
: gmx::TextTableFormatter::Impl::ColumnData
- bX
: TpxFileHeader
- bXSet
: MoleculePatch