- d -

• d2a : gmx::analysismodules::anonymous_namespace{sasa.cpp}::t_conect
• d2b : gmx::analysismodules::anonymous_namespace{sasa.cpp}::t_conect
• d3 : t_bb
• d4 : t_bb
• d5 : t_bb
• d_cell : gmx::cellInfo
• d_coefficients : PmeGpuAtomParams
• d_coordinates : PmeGpuAtomParams
• d_dtheta : PmeGpuAtomParams
• d_forces : PmeGpuAtomParams
• d_fourierGrid : PmeGpuGridParams
• d_fractShiftsTable : PmeGpuGridParams
• d_gridlineIndices : PmeGpuAtomParams
• d_gridlineIndicesTable : PmeGpuGridParams
• d_realGrid : PmeGpuGridParams
• d_splineModuli : PmeGpuGridParams
• d_theta : PmeGpuAtomParams
• d_virialAndEnergy : PmeGpuConstParams
• data : gmx_sparsematrix , gmx_enfrot , t_forcetable
• data_ : gmx::internal::AnalysisDataHandleImpl , gmx::internal::AnalysisDataStorageImpl , gmx::MrcDensityMapOfFloatReader::Impl , gmx::MrcDensityMapOfFloatWriter::Impl , gmx::GaussTransform3D::Impl , anonymous_namespace{indexutil.cpp}::IndexBlockTest
• dataMode_ : gmx::MrcDensityMapHeader
• datasetNames_ : gmx::TrajectoryAnalysisModule::Impl
• datasets_ : gmx::TrajectoryAnalysisModule::Impl
• dataStatistics_ : gmx::MrcDensityMapHeader
• db : AtomProperty
• dd_nc : CheckpointHeaderContents
• ddBondedChecking : gmx::DomdecOptions , ReverseTopOptions
• ddbox_ : gmx::DomainDecompositionBuilder::Impl
• ddBoxIsDynamic : UnitCellInfo
• ddCellIndex_ : gmx::DomainDecompositionBuilder::Impl
• ddDimensions : DDGridSetup
• ddGridSetup_ : gmx::DomainDecompositionBuilder::Impl
• ddist : gmx::Lincs
• ddp_count : t_state
• ddp_count_cg_gl : t_state
• ddpCountPairSearch : anonymous_namespace{minimize.cpp}::EnergyEvaluator
• ddRankSetup_ : gmx::DomainDecompositionBuilder::Impl
• ddSettings_ : gmx::DomainDecompositionBuilder::Impl
• debug : gmx::MDLogger
• debugLevel_ : gmx::SelectionCollection::Impl
• def : AtomProperty
• defaultFileName_ : gmx::FileNameOptionManager::Impl
• defaultNstImd : gmx::ImdSession::Impl
• defaultTolerance : gmx::CubicSplineTable , gmx::QuadraticSplineTable
• defaultTolerance_ : gmx::test::TestReferenceChecker::Impl
• defining_atomnames : gmx_help_make_index_group
• deform : gmx::LegacySimulatorData , gmx::BoxDeformationHandle
• degangle : gmx_potfit , gmx_enfrotgrp
• dekindl : ekinstate_t
• delta : gmx::shakedata
• delta_t : gmx::SimulationTimeStep
• deltaF : anonymous_namespace{edsam.cpp}::t_edflood
• deltaF0 : anonymous_namespace{edsam.cpp}::t_edflood
• deltaLambda : gmx::test::anonymous_namespace{freeenergyparameters.cpp}::FreeEnergyParameterTestParameters
• deltaQ : t_swap
• derivative : gmx::AnalyticalSplineTableInput , gmx::NumericalSplineTableInput
• desc : t_pargs , t_mapping , gmx::AnalyticalSplineTableInput , gmx::NumericalSplineTableInput
• description : gmx::anonymous_namespace{gpu_3dfft_sycl_rocfft.cpp}::RocfftPlan
• destinations : gmx_repl_ex
• dev : gmx::HardwareTopology::Device
• dev_rundata : NbnxmGpu
• deviceContext_ : NbnxmGpu , PmeGpuProgramImpl , PmeGpuSpecific
• deviceDetectionWarnings_ : gmx::DeviceDetectionResult
• deviceId : gmx::HardwareTopology::Device
• deviceId_ : gmx::GpuTaskMapping
• deviceInfoList_ : gmx::DeviceDetectionResult
• devices : gmx::HardwareTopology::Machine
• devicesSelectedByUser : gmx_hw_opt_t
• deviceStreams : NbnxmGpu
• deviceVendor : DeviceInformation
• dfhist : t_state
• dhdlambda : gmx::Task
• diagonal_2xnn_j_minus_i : nbnxn_atomdata_t::SimdMasks
• diagonal_4xn_j_minus_i : nbnxn_atomdata_t::SimdMasks
• didPairlistH2D : Nbnxm::GpuTimers::Interaction , NbnxmGpu
• didPrune : Nbnxm::GpuTimers::Interaction , NbnxmGpu
• didRollingPrune : Nbnxm::GpuTimers::Interaction , NbnxmGpu
• diffusionCoefficient : gmx::analysismodules::anonymous_namespace{msd.cpp}::MoleculeData , gmx::analysismodules::anonymous_namespace{msd.cpp}::MsdGroupData
• dihedrals : AllVsiteBondedInteractions
• dim : t_pullcoord , t_pbc
• dimParams : gmx::DimParams , gmx::test::AwhTestParameters
• dir : gmx::DataFileInfo
• dispersion_shift : NBParamGpu , cl_nbparam_params
• disre_initf : history_t
• disre_rm3tav : history_t
• dist : swap_compartment
• distance_squared_tolerance : gmx::shakedata
• distArray_ : gmx::analysismodules::anonymous_namespace{pairdist.cpp}::PairDistanceModuleData
• distccut : methoddata_insolidangle
• dlbOption : gmx::DomdecOptions
• dlbScaling : gmx::DomdecOptions
• doAll : Nbnxm::KernelBenchOptions
• domain : gmx::HardwareTopology::Device
• domainGroups : AtomDistribution
• domdec_ : gmx::DomainInfo
• domdecOptions : gmx::LegacyMdrunOptions
• doNeighborSearch : gmx::StepWorkload
• doRerun : gmx::LegacySimulatorData
• doTestParticleInsertion : Nbnxm::GridSet::DomainSetup
• double_prec : CheckpointHeaderContents
• doubleToler : gmx::test::anonymous_namespace{nb_free_energy.cpp}::ListInput , gmx::test::anonymous_namespace{pairs.cpp}::ListInput
• dt : anonymous_namespace{edsam.cpp}::t_edflood , UmbrellaOptions , t_UmbrellaWindow , gmx::AnalysisDataDisplacementModule::Impl
• DTensors : t_oriresdata
• DTensorsEnsembleAv : t_oriresdata
• DTensorsTimeAndEnsembleAv : t_oriresdata
• dtoler : gmx::test::anonymous_namespace{bonded.cpp}::iListInput
• dtSample : gmx::CorrelationGrid
• dummy : gmx_cache_protect_t
• dummyMass : VirtualSiteConfiguration
• dummySelection_ : gmx::test::ModuleTest
• dummyTopology_ : gmx::test::ModuleTest
• dv : pull_group_work_t
• dvdl : DispersionCorrection::Correction
• dvdl_lin : gmx_enerdata_t
• dvdl_nonlin : gmx_enerdata_t
• dvdlambda : gmx::test::anonymous_namespace{bonded.cpp}::OutputQuantities
• dvdLambda : gmx::test::anonymous_namespace{pairs.cpp}::OutputQuantities , gmx::test::anonymous_namespace{nb_free_energy.cpp}::OutputQuantities
• dxdf : gmx::VsiteThread
• dynamicGroup0 : pull_coord_work_t
• dynamicPruneTime : gmx_wallclock_gpu_nbnxn_t