Here is a list of all documented class members with links to the class documentation for each member:
- c -
- c
: t_pargs
, gmx_nbnxn_kernel_timing_data_t
- c_ind_loc
: swap_group
- c_rf
: cu_nbparam
, cl_nbparam
, cl_nbparam_params
- calculate()
: gmx::SurfaceAreaCalculator
- callGrompp()
: gmx::test::SimulationRunner
- callGromppOnThisRank()
: gmx::test::SimulationRunner
- callMdrun()
: gmx::test::SimulationRunner
- capacity()
: gmx::ArrayRef< T >
, gmx::ConstArrayRef< T >
- cBooleanNodeName
: gmx::test::TestReferenceChecker::Impl
- cdata
: gmx::SelectionTreeElement
- center
: t_methoddata_insolidangle
, swap_group
- cfrac
: t_methoddata_insolidangle
- cgrp
: gmx::SelectionTreeElement
- channel_label
: swap_group
- charge()
: gmx::SelectionPosition
- chargeA
: gmx_pme_pp
- charges()
: gmx::Selection
- checkBoolean()
: gmx::test::TestReferenceChecker
- checkCompound()
: gmx::test::TestReferenceChecker
- checkDouble()
: gmx::test::TestReferenceChecker
- checkEmptySequence()
: gmx::test::TestReferenceChecker
- checker()
: gmx::test::StringTestBase
- checkFileContents()
: gmx::test::StringTestBase
- checkFloat()
: gmx::test::TestReferenceChecker
- checkIndexGroup()
: gmx::SelectionTreeElement
- checkInt64()
: gmx::test::TestReferenceChecker
- checkInteger()
: gmx::test::TestReferenceChecker
- checkModuleProperties()
: gmx::AnalysisDataModuleManager::Impl
- checkModuleProperty()
: gmx::AnalysisDataModuleManager::Impl
- checkOutputFiles()
: gmx::test::CommandLineTestHelper
, gmx::test::CommandLineTestBase
- checkPresent()
: gmx::test::TestReferenceChecker
- checkReal()
: gmx::test::TestReferenceChecker
- checkRedirectedFiles()
: gmx::test::TestFileOutputRedirector
- checkRedirectedOutputFiles()
: gmx::test::StringTestBase
- checkReferencePoints()
: gmx::test::MockAnalysisDataModule::Impl
- checkSequence()
: gmx::test::TestReferenceChecker
- checkSequenceArray()
: gmx::test::TestReferenceChecker
- checkSequenceCompound()
: gmx::test::TestReferenceChecker
- checkString()
: gmx::test::TestReferenceChecker
- checkStringBlock()
: gmx::test::TestReferenceChecker
- checkText()
: gmx::test::StringTestBase
- checkUInt64()
: gmx::test::TestReferenceChecker
- checkUnsortedAtoms()
: gmx::SelectionTreeElement
- checkValue()
: gmx::test::TestReferenceChecker
- checkVector()
: gmx::test::TestReferenceChecker
- child
: gmx::SelectionTreeElement
, gmx::anonymous_namespace{exceptions.cpp}::ErrorMessage
- ci
: gmx::AnalysisDataDisplacementModule::Impl
- cIdAttrName
: gmx::test::TestReferenceChecker::Impl
- cInt64NodeName
: gmx::test::TestReferenceChecker::Impl
- cIntegerNodeName
: gmx::test::TestReferenceChecker::Impl
- cj4
: cu_plist
, cl_plist
- cj4_nalloc
: cu_plist
, cl_plist
- clear()
: gmx::AnalysisDataValue
, gmx::AnalysisDataFrameLocalDataSetHandle< ValueType >
, gmx::AnalysisDataFrameLocalDataHandle< ValueType >
, gmx::TextTableFormatter
, gmx::OptionStorageTemplate< T >
, gmx::FlagsTemplate< FlagType >
, gmx::MessageStringCollector
- clearAll()
: gmx::FlagsTemplate< FlagType >
- clearFlag()
: gmx::AbstractOption
, gmx::AbstractOptionStorage
- clearFrame()
: gmx::internal::AnalysisDataStorageFrameData
- clearSet()
: gmx::AbstractOptionStorage
, gmx::OptionStorageTemplate< T >
- clearSymbolTable()
: gmx::SelectionCollection::Impl
- clientsocket
: gmx_IMD
- clone()
: gmx::AbstractAverageHistogram
- close()
: gmx::File
- CMainCommandLineModule()
: gmx::anonymous_namespace{cmdlinemodulemanager.cpp}::CMainCommandLineModule
- CMainFunction
: gmx::anonymous_namespace{cmdlinemodulemanager.cpp}::CMainCommandLineModule
, gmx::CommandLineModuleManager
- cmpop
: t_methoddata_compare
- cmpt
: t_methoddata_compare
- coll
: gmx_ana_poscalc_t
- collection_
: gmx::SelectionOptionManager::Impl
- columnCount()
: gmx::AbstractAnalysisData
, gmx::AnalysisDataPointSetRef
, gmx::AnalysisDataStorageFrame
, gmx::AnalysisDataFrameAverager
, gmx::test::AnalysisDataTestInput
- columnCounts_
: gmx::AbstractAnalysisData::Impl
- ColumnData()
: gmx::TextTableFormatter::Impl::ColumnData
- columnData()
: gmx::TextTableFormatter::Impl
- ColumnList
: gmx::TextTableFormatter::Impl
- columns_
: gmx::TextTableFormatter::Impl
- commandLine()
: gmx::CommandLineProgramContext
, gmx::anonymous_namespace{programcontext.cpp}::DefaultProgramContext
, gmx::ProgramContextInterface
, gmx::test::CommandLineTestBase
, gmx::test::anonymous_namespace{testinit.cpp}::TestProgramContext
- CommandLine()
: gmx::test::CommandLine
- CommandLineHelpContext()
: gmx::CommandLineHelpContext
- CommandLineHelpModule()
: gmx::CommandLineHelpModule
- CommandLineHelpWriter()
: gmx::CommandLineHelpWriter
- CommandLineModuleGroup()
: gmx::CommandLineModuleGroup
- CommandLineModuleGroupData()
: gmx::CommandLineModuleGroupData
- CommandLineModuleManager()
: gmx::CommandLineModuleManager
- CommandLineParser()
: gmx::CommandLineParser
- CommandLineProgramContext()
: gmx::CommandLineProgramContext
- CommandLineTestHelper()
: gmx::test::CommandLineTestHelper
- CommandsHelpTopic()
: gmx::anonymous_namespace{cmdlinehelpmodule.cpp}::CommandsHelpTopic
- commitValues()
: gmx::OptionStorageTemplate< T >
, anonymous_namespace{abstractoptionstorage.cpp}::MockOptionStorage
- comp
: t_swap
- comp_from
: swap_group
- comp_now
: swap_group
- compareSimd4RealEq()
: gmx::test::Simd4Test
- compareSimd4RealUlp()
: gmx::test::Simd4Test
- compareSimdInt32()
: gmx::test::SimdTest
- compareSimdRealEq()
: gmx::test::SimdTest
- compareSimdRealUlp()
: gmx::test::SimdTest
- compareto
: gmx_help_make_index_group
- compareVectorEq()
: gmx::test::SimdBaseTest
- compareVectorRealUlp()
: gmx::test::SimdBaseTest
- compile()
: gmx::SelectionCollection
, gmx::SelectionCompiler
- completeDefaultFileName()
: gmx::FileNameOptionManager
- completeFileName()
: gmx::FileNameOptionManager
- completionWriter_
: gmx::CommandLineHelpContext::Impl
- compressed_symmetric
: gmx_sparsematrix
- compsol
: t_swap
- computeAverageCoveredFraction()
: gmx::internal::SelectionData
- computeStorageLocation()
: gmx::internal::AnalysisDataStorageImpl
- consoleOptionsFormatter()
: gmx::HelpWriterContext::Impl::SharedState
- const_iterator
: gmx::ArrayRef< T >
, gmx::ConstArrayRef< T >
- const_pointer
: gmx::ArrayRef< T >
, gmx::ConstArrayRef< T >
- const_reference
: gmx::ArrayRef< T >
, gmx::ConstArrayRef< T >
- const_reverse_iterator
: gmx::ConstArrayRef< T >
, gmx::ArrayRef< T >
- ConstArrayRef()
: gmx::ConstArrayRef< T >
- constArrayRefFromArray()
: gmx::ConstArrayRef< T >
- constArrayRefFromPointers()
: gmx::ConstArrayRef< T >
- constArrayRefFromVector()
: gmx::ConstArrayRef< T >
- convertOptionValue()
: gmx::SelectionOptionManager
- convertValue()
: gmx::AbstractOptionStorage
, gmx::OptionStorageTemplate< T >
- coordinates()
: gmx::Selection
- coordsendbuf
: gmx_IMD
- copyContents()
: gmx::AbstractAnalysisArrayData
- copyright()
: gmx::BinaryInformationSettings
- copyValues()
: gmx::anonymous_namespace{pargs.cpp}::OptionsAdapter
- coulomb_tab
: cu_nbparam
- coulomb_tab_climg2d
: cl_nbparam
- coulomb_tab_scale
: cl_nbparam
, cu_nbparam
, cl_nbparam_params
- coulomb_tab_size
: cl_nbparam_params
, cu_nbparam
, cl_nbparam
- coulomb_tab_texobj
: cu_nbparam
- count()
: gmx_ana_pos_t
, pme_setup_t
, gmx::SelectionOptionManager::Impl::SelectionRequest
- countArray_
: gmx::analysismodules::anonymous_namespace{pairdist.cpp}::PairDistanceModuleData
- coveredFraction()
: gmx::Selection
- cRealNodeName
: gmx::test::TestReferenceChecker::Impl
- create()
: gmx::SelectionParserParameter
, gmx::anonymous_namespace{cmdlineprogramcontext.cpp}::DefaultExecutableEnvironment
- createCalculation()
: gmx::PositionCalculationCollection
, gmx::PositionCalculationCollection::Impl
- createCalculationFromEnum()
: gmx::PositionCalculationCollection
- createEmpty()
: gmx::SelectionLocation
- createExpr()
: gmx::SelectionParserValue
- createFromExpression()
: gmx::SelectionParserParameter
- createInteger()
: gmx::SelectionParserValue
- createIntegerRange()
: gmx::SelectionParserValue
- createList()
: gmx::SelectionParserValue
, gmx::SelectionParserParameter
, gmx::SelectionParserValue
- createModule()
: gmx::test::TrajectoryAnalysisModuleTestFixture< ModuleInfo >
, gmx::test::AbstractTrajectoryAnalysisModuleTestFixture
, gmx::CommandLineOptionsModuleInterface
- createModuleHelpTopic()
: gmx::CommandLineHelpModule
- createPosition()
: gmx::SelectionParserValue
- createReal()
: gmx::SelectionParserValue
- createRealRange()
: gmx::SelectionParserValue
- createStorage()
: gmx::AbstractOption
- createString()
: gmx::SelectionParserValue
- cRootNodeName
: gmx::test::TestReferenceData::Impl
- cSequenceLengthName
: gmx::test::TestReferenceChecker::Impl
- cSequenceType
: gmx::test::TestReferenceChecker::Impl
- cStringNodeName
: gmx::test::TestReferenceChecker::Impl
- cUInt64NodeName
: gmx::test::TestReferenceChecker::Impl
- cum
: t_UmbrellaWindow
- currentFrame()
: gmx::AnalysisDataStorage
- currentFrame_
: gmx::internal::AnalysisDataHandleImpl
- currentLifetimes_
: gmx::AnalysisDataLifetimeModule::Impl
- currentLocation
: gmx_sel_lexer_t
- currentOption_
: gmx::OptionsAssigner::Impl
- currentPosition()
: gmx::analysismodules::anonymous_namespace{angle.cpp}::AnglePositionIterator
- currentSection()
: gmx::OptionsAssigner::Impl
- currentSelection()
: gmx::analysismodules::anonymous_namespace{angle.cpp}::AnglePositionIterator
- currentTopic()
: gmx::HelpManager::Impl
- currentTopicAsString()
: gmx::HelpManager::Impl
- currentValueCount_
: gmx::OptionsAssigner::Impl
- currentValuesSelected()
: gmx::analysismodules::anonymous_namespace{angle.cpp}::AnglePositionIterator
- currIndex_
: gmx::AnalysisDataModuleManager::Impl
- currNode_
: gmx::test::TestReferenceChecker::Impl
- currsize
: gmx_sel_mempool_t
- currValues_
: gmx::AnalysisDataDisplacementModule::Impl
- cutoff
: t_methoddata_distance
- cVectorType
: gmx::test::TestReferenceChecker::Impl
- cXmlStyleSheetContent
: gmx::test::TestReferenceData::Impl
- cXmlStyleSheetNodeName
: gmx::test::TestReferenceData::Impl
- cXmlVersion
: gmx::test::TestReferenceData::Impl
- cycles
: gmx_pme_comm_vir_ene_t
, pme_setup_t
- cyl0and1
: t_swap