Here is a list of all documented class members with links to the class documentation for each member:

- m -

• M : t_oriresdata
• m : sort_along_vec_t , gmx_ana_pos_t , SimulationParticle , swap_group
• m_elements : gmx::EnumerationArray< EnumType, DataType, ArraySize >
• m_loc : gmx_enfrotgrp
• machine() : gmx::HardwareTopology
• mainRanksComm_ : gmx_multisim_t
• makeComplexTopology() : anonymous_namespace{indexutil.cpp}::IndexBlockTest
• makeCumulative() : gmx::AbstractAverageHistogram
• makeIndexOfNextPart() : gmx::anonymous_namespace{handlerestart.cpp}::StartingBehaviorHandler
• makeMDAtoms : gmx::MDAtoms
• makeSimpleTopology() : anonymous_namespace{indexutil.cpp}::IndexBlockTest
• makeSubscription() : gmx::test::anonymous_namespace{observablesreducer.cpp}::Subscriber
• makeTable() : gmx::TabulatedNormalDistribution< RealType, tableBits >
• malloc() : gmx::HostAllocationPolicy , gmx::AlignedAllocationPolicy , gmx::PageAlignedAllocationPolicy
• manageGeneratedOutputFile() : gmx::test::TestFileManager
• manager() : gmx::test::CommandLineModuleManagerTestBase
• managers_ : gmx::internal::OptionSectionImpl , gmx::internal::OptionsImpl
• map : t_matrix
• mapb : gmx_ana_indexmap_t
• MapConstIterator : gmx::EnergyFrame
• mapid : gmx_ana_indexmap_t
• mappedId() : gmx::SelectionPosition
• mappedIds() : gmx::Selection
• mapping() : gmx::layout_right::mapping< Extents > , gmx::basic_mdspan< ElementType, Extents, LayoutPolicy, AccessorPolicy > , gmx::layout_right::mapping< Extents >
• mapping_type : gmx::basic_mdspan< ElementType, Extents, LayoutPolicy, AccessorPolicy >
• mapToFrameAtoms_ : gmx::PositionCalculationCollection::Impl
• MapType : gmx::EnergyFrame
• markAsReadyToReduce() : gmx::ObservablesReducer
• markAsSet() : gmx::AbstractOptionStorage
• markNotified() : gmx::internal::AnalysisDataStorageFrameData
• mask() : gmx::test::AllocatorTest< T >
• maskArray() : gmx::DiagonalMasker< nR, kernelLayout, KernelLayoutClusterRatio::JSizeEqualsISize > , gmx::DiagonalMasker< nR, kernelLayout, KernelLayoutClusterRatio::JSizeIsDoubleISize > , gmx::DiagonalMasker< nR, kernelLayout, KernelLayoutClusterRatio::JSizeIsHalfISize >
• mass : SystemMomentum , gmx::analysismodules::anonymous_namespace{msd.cpp}::MoleculeData , gmx::SelectionPosition
• massA : t_mdatoms
• massB : t_mdatoms
• masses() : gmx::Selection , gmx::SelectionTopologyProperties
• massT : t_mdatoms
• match : BondedInteraction , anonymous_namespace{sm_keywords.cpp}::StringKeywordMatchItem
• MatchAndExplain() : gmx::test::FloatTypeMatcher< FloatType > , gmx::test::RVecMatcher< FloatType >
• matcher : gmx::test::anonymous_namespace{extract_cluster.cpp}::ManualOutputFile
• matches : anonymous_namespace{sm_keywords.cpp}::t_methoddata_kwstr
• matchFullConfiguration() : gmx::test::ConfMatch
• matchType : anonymous_namespace{sm_keywords.cpp}::t_methoddata_kwstr
• matlam : gmx::Lincs
• matrix : t_matrix
• matrix_ : gmx::MrcDensitySkewData
• max() : Nbnxm::BoundingBox::Corner , gmx::ExponentialDistribution< RealType > , gmx::GammaDistribution< RealType > , gmx::NormalDistribution< RealType > , gmx::TabulatedNormalDistribution< RealType, tableBits > , gmx::ThreeFry2x64General< rounds, internalCounterBits > , gmx::UniformIntDistribution< IntType > , gmx::UniformRealDistribution< RealType >
• max_ : gmx::MrcDataStatistics
• max_beta : gmx_enfrotgrp
• max_connect : gmx::Lincs
• max_cutoff2 : t_pbc
• max_nthread_uniform : bonded_threading_t
• max_size() : gmx::FixedCapacityVector< typename, size_t >
• max_store : gmx::AnalysisDataDisplacementModule::Impl
• maxAtom : gmx::AtomIndexExtremes
• maxAtomGroupRadius : Nbnxm::Grid::Dimensions
• maxbins : methoddata_insolidangle
• maxDeviation : gmx::LincsDeviations
• maxGridWidthX : PmeGpu
• maximumHoursToRun : gmx::MdrunOptions
• MaxNumFrames() : gmx::test::MaxNumFrames
• maxNumIterations_ : gmx::anonymous_namespace{shake.cpp}::ShakeTest
• maxNumThreads_ : pull_group_work_t
• maxNumTrajectoryFrames : gmx::test::TrajectoryFrameMatchSettings
• maxRelativeLatency : gmx::HardwareTopology::Numa
• maxshift_x : gmx_pme_comm_n_box_t
• maxshift_y : gmx_pme_comm_n_box_t
• maxsize : gmx_sel_mempool_t
• maxThreads() : gmx::HardwareTopology
• maxUpdateGroupRadius() : gmx::UpdateGroupsCog
• maxValueCount() : gmx::AbstractOptionStorage , gmx::OptionInfo
• maxValueCount_ : gmx::AbstractOption
• mB() : SimulationParticle
• mbuf : gmx_enfrot
• mc : gmx_enfrotgrp
• mc_sorted : gmx_enfrotgrp
• mdata : gmx::SelectionTreeElement
• mdatoms() : gmx::MDAtoms
• mdAtoms : anonymous_namespace{minimize.cpp}::EnergyEvaluator
• mdAtoms_ : gmx::LegacySimulatorData , gmx::TopologyData
• mdlog : anonymous_namespace{minimize.cpp}::EnergyEvaluator
• mdLog_ : gmx::ImdSession::Impl , gmx::LegacySimulatorData
• mdlog_ : gmx::DomainDecompositionBuilder::Impl , gmx::LocalTopologyChecker::Impl
• MDLogger() : gmx::MDLogger
• mdModulesNotifiers_ : gmx::LegacySimulatorData
• mdpDensiftAllDefaultsChanged_ : gmx::test::DensityFittingTest
• mdpEminDensfitYesUnsetValues : gmx::test::DensityFittingTest
• mdpEnergyAndDensityfittingIntervalMismatch_ : gmx::test::DensityFittingTest
• mdpInputContents_ : gmx::test::SimulationRunner
• mdpMdDensfitYesUnsetValues : gmx::test::DensityFittingTest
• mdpOptionProvider() : gmx::anonymous_namespace{colvarsMDModule.cpp}::ColvarsMDModule , gmx::anonymous_namespace{colvarsMDModule_stub.cpp}::ColvarsMDModule , gmx::anonymous_namespace{densityfitting.cpp}::DensityFitting , gmx::anonymous_namespace{electricfield.cpp}::ElectricField , gmx::anonymous_namespace{qmmm.cpp}::QMMM , gmx::IMDModule , gmx::RestraintMDModule
• mdpSkipDensityfittingEveryOtherStep_ : gmx::test::DensityFittingTest
• mdpSource_ : gmx::test::SimulationRunner
• mdpTransformationMatrix1degAroundY_ : gmx::test::DensityFittingTest
• mdpTransformationMatrixIdentity_ : gmx::test::DensityFittingTest
• mdpTransformationMatrixWrongValues_ : gmx::test::DensityFittingTest
• mdpTranslationSet_ : gmx::test::DensityFittingTest
• mdpTranslationSetWrongValues_ : gmx::test::DensityFittingTest
• mdrunCaller_ : gmx::test::MultiSimTest , gmx::test::TerminationHelper
• mdRunFilename_ : gmx::MdRunInputFilename
• Mdrunner() : gmx::Mdrunner
• mdrunner() : gmx::Mdrunner
• MdrunnerBuilder() : gmx::MdrunnerBuilder
• MdrunNoAppendContinuationIsExact() : gmx::test::anonymous_namespace{exactcontinuation.cpp}::MdrunNoAppendContinuationIsExact
• mdrunOptions : gmx::LegacyMdrunOptions
• mdrunOptions_ : gmx::LegacySimulatorData , gmx::SimulatorConfig
• mdw : pull_group_work_t
• me() : gmx::OptionTemplate< T, U >
• mean() : gmx::NormalDistribution< RealType >::param_type , gmx::NormalDistribution< RealType > , gmx::TabulatedNormalDistribution< RealType, tableBits >::param_type , gmx::TabulatedNormalDistribution< RealType, tableBits >
• mean_ : gmx::MrcDataStatistics
• meanComparison : gmx::anonymous_namespace{densityfit.cpp}::CrossCorrelationEvaluationHelperValues
• meanReference : gmx::anonymous_namespace{densityfit.cpp}::CrossCorrelationEvaluationHelperValues
• membed() : gmx::MembedHolder
• membed_ : gmx::LegacySimulatorData
• MembedHolder() : gmx::MembedHolder
• memory : gmx::HardwareTopology::NumaNode
• mempool : gmx_ana_selcollection_t , gmx::SelectionTreeElement
• MempoolGroupReserver() : anonymous_namespace{evaluate.cpp}::MempoolGroupReserver
• mempoolRelease() : gmx::SelectionTreeElement
• mempoolReserve() : gmx::SelectionTreeElement
• MempoolSelelemReserver() : anonymous_namespace{evaluate.cpp}::MempoolSelelemReserver
• merge() : gmx::UnionFinder , gmx::test::CommandLine , gmx::SelectionTopologyProperties
• mergeGroups() : gmx::MappedUnionFinder
• mergeObject() : gmx::KeyValueTreeObjectBuilder
• MessageStringContext() : gmx::MessageStringContext
• MessageWriterFileNoThrow() : gmx::anonymous_namespace{exceptions.cpp}::MessageWriterFileNoThrow
• MessageWriterTextWriter() : gmx::anonymous_namespace{exceptions.cpp}::MessageWriterTextWriter
• meth_ : gmx::SelectionParserSymbol::Impl
• method : gmx::SelectionTreeElement , t_register_method
• MethodSymbol : gmx::SelectionParserSymbol
• methodValue() : gmx::SelectionParserSymbol
• mH : SettleWaterTopology
• mhbox_diag : t_pbc
• min() : Nbnxm::BoundingBox::Corner , gmx::ExponentialDistribution< RealType > , gmx::GammaDistribution< RealType > , gmx::TabulatedNormalDistribution< RealType, tableBits > , gmx::ThreeFry2x64General< rounds, internalCounterBits > , gmx::UniformIntDistribution< IntType > , gmx::UniformRealDistribution< RealType > , gmx::NormalDistribution< RealType >
• min_ : gmx::MrcDataStatistics
• minAtom : gmx::AtomIndexExtremes
• MindistAction() : gmx::anonymous_namespace{nbsearch.cpp}::MindistAction
• minimumCommunicationRange : gmx::DomdecOptions
• minimumDistance() : gmx::AnalysisNeighborhoodSearch
• minParticleCountToRecalculateSplines : PmeGpu
• minValueCount() : gmx::OptionInfo , gmx::AbstractOptionStorage
• minValueCount_ : gmx::AbstractOption
• misc_ops_and_local_H2D_done : NbnxmGpu
• MissingElementConnectionError() : gmx::MissingElementConnectionError
• mlambda : gmx::Lincs
• mm : gmx::LinkFrontier
• mmIndices_ : gmx::QMMMParameters
• mO : SettleWaterTopology
• MockAverageHistogram() : anonymous_namespace{histogram.cpp}::MockAverageHistogram
• MockModule() : gmx::test::MockModule
• MockOption() : anonymous_namespace{abstractoptionstorage.cpp}::MockOption
• MockOptionStorage() : anonymous_namespace{abstractoptionstorage.cpp}::MockOptionStorage
• mode() : gmx::AnalysisNeighborhoodSearch , gmx::AnalysisNeighborhood
• model() : gmx::CpuInfo
• modifyQMMMTopology() : gmx::QMMMOptions
• ModularSimulatorAlgorithmBuilder() : gmx::ModularSimulatorAlgorithmBuilder
• ModularSimulatorAlgorithmBuilderHelper() : gmx::ModularSimulatorAlgorithmBuilderHelper , gmx::ModularSimulatorAlgorithmBuilder
• ModularSimulatorError() : gmx::ModularSimulatorError
• module_ : gmx::AnalysisDataModuleManager::Impl::ModuleInfo
• moduleDisplayName() : gmx::CommandLineHelpContext
• moduleDisplayName_ : gmx::CommandLineHelpContext::Impl
• ModuleFactoryMethod : gmx::TrajectoryAnalysisCommandLineRunner
• ModuleGroupContents : gmx::anonymous_namespace{cmdlinehelpmodule.cpp}::IHelpExport
• moduleGroups_ : gmx::CommandLineModuleManager::Impl
• ModuleHelpTopic() : gmx::anonymous_namespace{cmdlinehelpmodule.cpp}::ModuleHelpTopic
• ModuleInfo() : gmx::AnalysisDataModuleManager::Impl::ModuleInfo
• ModuleList : gmx::CommandLineModuleGroupData , gmx::AnalysisDataModuleManager::Impl
• moduleManager() : gmx::AbstractAnalysisData
• modules() : gmx::CommandLineModuleGroupData
• modules_ : gmx::internal::AnalysisDataStorageImpl , gmx::AbstractAnalysisData::Impl , gmx::AnalysisDataModuleManager::Impl , gmx::CommandLineModuleManager::Impl
• molblockIndex : AtomInMolblock
• molblockIndices() : gmx_reverse_top_t
• moleculeIndex : AtomInMolblock , MolecularTopologyAtomIndices
• moleculeIndexStart : MoleculeBlockIndices
• moleculeType : MolecularTopologyAtomIndices , AtomInMolblock , AtomProxy
• molname : swap_group
• mols : MoleculeInformation , gmx::ImdSession::Impl
• momentum : SystemMomentum
• momentumFullStep : SystemMomenta
• momentumHalfStep : SystemMomenta
• momentumOldHalfStep : SystemMomenta
• mon : anonymous_namespace{edsam.cpp}::t_edvecs
• moveUmbrella() : gmx::BiasState
• mp : gmx_sel_evaluate_t
• mpi_bufsize : gmx_enfrot
• mpi_comm_mysim : gmx_pme_pp
• mpi_inbuf : gmx_enfrot
• mpi_outbuf : gmx_enfrot
• mpiComm : PmeShared
• mpiCommX : PmeShared
• mpiCommY : PmeShared
• mpiSetupValid() : gmx::test::MultiSimTest
• MrcDensityMapOfFloatFromFileReader() : gmx::MrcDensityMapOfFloatFromFileReader
• MrcDensityMapOfFloatReader() : gmx::MrcDensityMapOfFloatReader
• MrcDensityMapOfFloatWriter() : gmx::MrcDensityMapOfFloatWriter
• ms : anonymous_namespace{minimize.cpp}::EnergyEvaluator
• ms_ : gmx::LegacySimulatorData
• msdData : gmx::analysismodules::anonymous_namespace{msd.cpp}::MoleculeData
• msds : gmx::analysismodules::anonymous_namespace{msd.cpp}::MsdGroupData
• msdSums : gmx::analysismodules::anonymous_namespace{msd.cpp}::MsdGroupData
• msp : gmx_sel_lexer_t
• mstack : gmx_sel_lexer_t
• mstack_alloc : gmx_sel_lexer_t
• MSVC_DIAGNOSTIC_IGNORE() : nbnxn_excl_t
• mtop() : gmx::TopologyInformation
• mtop_ : gmx::DomainDecompositionBuilder::Impl , gmx::anonymous_namespace{updategroups.cpp}::UpdateGroupsTest , gmx::test::anonymous_namespace{energyoutput.cpp}::EnergyOutputTest , gmx::LocalTopologyChecker::Impl
• mtsFactor : PairlistParams
• MttkBoxScaling() : gmx::MttkBoxScaling
• MttkData() : gmx::MttkData
• MttkElement() : gmx::MttkElement
• MultiDimArray() : gmx::MultiDimArray< TContainer, Extents, LayoutPolicy >
• multisimCommRec_ : gmx::SimulatorEnv
• multiSimulation_ : gmx::SimulationContext
• multiValue() : gmx::OptionTemplate< T, U >
• muStaging : DipoleData
• muStateAB : DipoleData
• mustCompareBox : gmx::test::TrajectoryFrameMatchSettings
• mustUseOneRank() : anonymous_namespace{resourcedivision.cpp}::SingleRankChecker
• muTot() : gmx::EnergyData
• muTotal_ : gmx::test::anonymous_namespace{energyoutput.cpp}::EnergyOutputTest
• mvcos : ekinstate_t
• mwscale : pull_group_work_t
• MyBase : gmx::OptionTemplate< T, U > , gmx::LegacyEnumOption< EnumType > , gmx::OptionStorageTemplate< T > , gmx::EnumOption< EnumType > , gmx::OptionStorageTemplateSimple< T >
• MyClass : gmx::OptionTemplate< T, U >