Here is a list of all documented class members with links to the class documentation for each member:
- t -
- t
: gmx::AnalysisDataDisplacementModule::Impl
, CheckpointHeaderContents
, gmx_kernel_timing_data_t
- t0
: gmx::AnalysisDataDisplacementModule::Impl
- t_
: gmx::ForceProviderInput
- T_abs
: gmx::IMDEnergyBlock
- t_methoddata_kweval()
: t_methoddata_kweval
- t_oriresdata()
: t_oriresdata
- tablesOffsets
: PmeGpuGridParams
- tableSpacing()
: gmx::CubicSplineTable
, gmx::QuadraticSplineTable
- TabulatedNormalDistribution()
: gmx::TabulatedNormalDistribution< RealType, tableBits >
- tag
: gmx::PropagatorConnection
- target()
: gmx::PointState
- targetbinsize
: methoddata_insolidangle
- targetMetricScalingLimit
: gmx::BiasParams
- task
: gmx::Lincs
- task_
: gmx::GpuTaskMapping
- tau
: anonymous_namespace{edsam.cpp}::t_edflood
, t_UmbrellaWindow
- tausmooth
: t_UmbrellaWindow
- tbin
: methoddata_insolidangle
- tbinsize
: methoddata_insolidangle
- teardown()
: gmx::EnergyData
, gmx::PmeLoadBalanceHelper
- TearDownTestSuite()
: anonymous_namespace{domain_decomposition.cpp}::DomDecSpecialCasesTest
, gmx::test::MdrunTestFixtureBase
, gmx::test::anonymous_namespace{pmetest.cpp}::PmeTest
- temp
: gmx_repl_ex
- temperature_
: gmx::anonymous_namespace{updategroups.cpp}::UpdateGroupsTest
- temperatureCouplingIntegral
: gmx::TemperatureCouplingData
- temperatureCouplingScheme
: gmx::test::anonymous_namespace{energyoutput.cpp}::EnergyOutputTestParameters
- temperatureScaleFactor
: gmx::BiasParams
- tensors()
: gmx::CorrelationGrid
- tensorSize()
: gmx::CorrelationGrid
- term
: gmx_enerdata_t
- terminatable
: gmx::ImdOptions
- TerminationHelper()
: gmx::test::TerminationHelper
- termIsEnergy()
: gmx::EnergyTerm
- termMagnitude()
: gmx::test::FloatingPointDifference
- test()
: gmx::FlagsTemplate< FlagType >
- testAgainstAnalyticalSolution()
: gmx::test::anonymous_namespace{leapfrog.cpp}::LeapFrogTest
- testAgainstReferenceData()
: gmx::test::anonymous_namespace{leapfrog.cpp}::LeapFrogTest
- TestBody()
: gmx::test::anonymous_namespace{pmegathertest.cpp}::GatherTestBody
, gmx::test::anonymous_namespace{pmesolvetest.cpp}::SolveTestBody
, gmx::test::anonymous_namespace{pmesplinespreadtest.cpp}::SplineAndSpreadTestBody
, gmx::test::NbnxmKernelTestBody
- testData()
: gmx::test::XvgMatch
- TestDevice()
: gmx::test::TestDevice
- TestException()
: gmx::test::TestException
- TestFileManager()
: gmx::test::TestFileManager
- testFilesEqual()
: gmx::test::StringTestBase
- testIndex()
: gmx::AnalysisNeighborhoodPair
- TestProgramContext()
: gmx::test::anonymous_namespace{testinit.cpp}::TestProgramContext
- TestReferenceChecker()
: gmx::test::TestReferenceChecker
- TestReferenceData
: gmx::test::TestReferenceChecker
, gmx::test::TestReferenceData
- TestReferenceDataImpl()
: gmx::test::internal::TestReferenceDataImpl
- testSplineTableAgainstFunctions()
: gmx::test::anonymous_namespace{splinetable.cpp}::SplineTableTest< T >
- TestSystem()
: gmx::test::anonymous_namespace{kernel_test.cpp}::TestSystem
- testValueGenerator()
: gmx::test::anonymous_namespace{checkpointdata.cpp}::TestValues
- testWithRequirements()
: gmx::test::TrajectoryFrameWriterTest
- testWriteHelp()
: gmx::test::CommandLineTestBase
- text()
: gmx::anonymous_namespace{exceptions.cpp}::ErrorMessage
- TextFileMatch()
: gmx::test::TextFileMatch
- textForNextLine()
: gmx::TextTableFormatter::Impl::ColumnData
- TextInputFile()
: gmx::TextInputFile
- TextLineWrapper
: gmx::TextLineWrapperSettings
, gmx::TextLineWrapper
- TextLineWrapperSettings()
: gmx::TextLineWrapperSettings
- TextOutputFile()
: gmx::TextOutputFile
- TextReader()
: gmx::TextReader
- TextTableFormatter()
: gmx::TextTableFormatter
- TextWriter()
: gmx::TextWriter
- therm_integral
: t_state
- theta()
: gmx::GammaDistribution< RealType >::param_type
, gmx::GammaDistribution< RealType >
- this_extent
: gmx::detail::extents_analyse< R, dynamic_extent, StaticExtents...>
- thisRankHasAnyGpuTask()
: gmx::GpuTaskAssignments
- thisRankHasPmeGpuTask()
: gmx::GpuTaskAssignments
- ThisRankWillDoIO
: gmx::Bias
- thread_work_t()
: thread_work_t
- threadAffinity
: gmx_hw_opt_t
- threadData()
: gmx::ThreadingInfo
- threadDataNonLocalDependent()
: gmx::ThreadingInfo
- threadedForceBuffer
: bonded_threading_t
- ThreadedForceBuffer()
: gmx::ThreadedForceBuffer< ForceBufferElementType >
- ThreadForceBuffer()
: gmx::ThreadForceBuffer< ForceBufferElementType >
- threadForceBuffer()
: gmx::ThreadedForceBuffer< ForceBufferElementType >
- ThreadingInfo()
: gmx::ThreadingInfo
- threadsPerAtom
: PmeGpuSettings
- threadWorkObjects()
: gmx_reverse_top_t
- ThreeFry2x64()
: gmx::ThreeFry2x64< internalCounterBits >
- ThreeFry2x64Fast()
: gmx::ThreeFry2x64Fast< internalCounterBits >
- ThreeFry2x64General()
: gmx::ThreeFry2x64General< rounds, internalCounterBits >
- throwIfNotFound()
: gmx::DataFileOptions
- ThrowLocation()
: gmx::ThrowLocation
- Tij
: df_history_t
- Tij_empirical
: df_history_t
- Time
: gmx::CorrelationGrid
- time()
: gmx::EnergyAnalysisFrame
, gmx::TrajectoryFrame
- time_
: gmx::test::anonymous_namespace{energyoutput.cpp}::EnergyOutputTest
- timeAveragingInitFactor()
: t_oriresdata
- timeBegin()
: gmx::EnergyTerm
- timeEnd()
: gmx::EnergyTerm
- timeInterval()
: gmx::EnergyDriftTracker
- TimeOptionScaler()
: gmx::anonymous_namespace{timeunitmanager.cpp}::TimeOptionScaler< FloatingPointOptionInfo >
- timePerFrameIsSet
: gmx_tng_trajectory
- timers
: NbnxmGpu
- timeScaleFactor()
: gmx::TimeUnitManager
- timeSpan()
: gmx::EnergyTerm
- timestep
: gmx::test::anonymous_namespace{leapfrog.cpp}::LeapFrogTestParameters
- TimeStep()
: gmx::TimeStep
- timeStepValue
: gmx::OutputRequirements
- timeUnit
: gmx::TrajectoryAnalysisSettings::Impl
, gmx::AnalysisDataPlotSettings
, gmx::TimeUnitManager
, gmx::TimeUnitBehavior
, gmx::TrajectoryAnalysisSettings
- timeUnitAsString()
: gmx::TimeUnitManager
- TimeUnitManager()
: gmx::TimeUnitManager
- timeValue()
: gmx::DoubleOption
, gmx::FloatOption
- timing
: gmx_wallclock_gpu_pme_t
- timingEvents
: PmeGpuSpecific
- timingOptions
: gmx::MdrunOptions
- timings
: NbnxmGpu
- title
: t_matrix
, gmx::anonymous_namespace{cmdlinehelpmodule.cpp}::RootHelpTopic
, gmx::anonymous_namespace{cmdlinehelpmodule.cpp}::CommandsHelpTopic
, gmx::anonymous_namespace{cmdlinehelpmodule.cpp}::ModuleHelpTopic
, gmx::CommandLineModuleGroupData
, gmx::TextTableFormatter::Impl::ColumnData
, gmx::AbstractSimpleHelpTopic
, gmx::AbstractCompositeHelpTopic
, gmx::SimpleHelpTopic< HelpText >
, gmx::CompositeHelpTopic< HelpText >
, gmx::IHelpTopic
, gmx::anonymous_namespace{selhelp.cpp}::KeywordDetailsHelpTopic
- title_
: gmx::TextTableFormatter::Impl::ColumnData
- tmass
: t_mdatoms
- tmass_
: gmx::test::anonymous_namespace{energyoutput.cpp}::EnergyOutputTest
- tmassA
: t_mdatoms
- tmassB
: t_mdatoms
- tmax
: gmx::AnalysisDataDisplacementModule::Impl
- tmpEq
: t_oriresdata
- tmpFrameAtoms_
: gmx::PositionCalculationCollection::Impl
- tmpv
: gmx::Lincs
- tng
: gmx_tng_trajectory
- tngBoxOut()
: gmx::TrajectoryElement
- tngBoxOutCompressed()
: gmx::TrajectoryElement
- tngLambdaOut()
: gmx::TrajectoryElement
- tngLambdaOutCompressed()
: gmx::TrajectoryElement
- to()
: gmx::KeyValueTreeTransformRuleBuilder::AfterFrom< FromType >
- toArrayRef()
: gmx::MultiDimArray< TContainer, Extents, LayoutPolicy >
- toDVec()
: gmx::BasicVector< ValueType >
- toIVec()
: gmx::BasicVector< ValueType >
- Tolerance
: UmbrellaOptions
- tolerance()
: gmx::test::ConfMatch
, gmx::test::XvgMatch
- tolerance_
: gmx::anonymous_namespace{shake.cpp}::ShakeTest
- ToleranceError()
: gmx::ToleranceError
- ToObject()
: gmx::KeyValueTreeTransformRuleBuilder::ToObject< FromType >
- toObject()
: gmx::KeyValueTreeTransformRuleBuilder::AfterFrom< FromType >
- toOptionName()
: gmx::CommandLineParser::Impl
- top
: anonymous_namespace{minimize.cpp}::EnergyEvaluator
, gmx_sel_evaluate_t
, gmx_ana_selcollection_t
- top_
: gmx::LegacySimulatorData
, gmx::PositionCalculationCollection::Impl
, gmx::SelMethodEvalContext
- top_global
: anonymous_namespace{minimize.cpp}::EnergyEvaluator
- topGlobal_
: gmx::LegacySimulatorData
- TopicStack
: gmx::HelpManager::Impl
- topicStack_
: gmx::HelpManager::Impl
- topInfo()
: gmx::QMMMTopologyPreprocessor
- topManager_
: anonymous_namespace{indexutil.cpp}::IndexBlockTest
- topology()
: gmx::ColvarsSimulationsParameters
, gmx::test::TopologyManager
, gmx::SelectionTopologyProperties
- Topology
: gmx::PositionCalculationCollection
- TopologyAndMasses
: gmx::PositionCalculationCollection
- TopologyData()
: gmx::TopologyData
- TopologyHolder()
: gmx::TopologyHolder
- topologyInformation()
: gmx::TrajectoryAnalysisRunnerCommon
- topologyIsIncorrect()
: gmx::analysismodules::anonymous_namespace{dssp.cpp}::SecondaryStructures
- topologyProvider()
: gmx::TrajectoryAnalysisRunnerCommon
- torque_v
: gmx_enfrotgrp
- toRVec()
: gmx::BasicVector< ValueType >
- toString()
: gmx::test::FloatingPointTolerance
, gmx::KeyValueTreePath
, gmx::MessageStringCollector
, gmx::StringOutputStream
, gmx::test::FloatingPointDifference
, gmx::test::CommandLine
- totalClassicalChargeOfQMAtoms
: gmx::QMMMTopologyInfo
- totalNumAtoms()
: gmx::StatePropagatorData
- totalSize
: gmx::anonymous_namespace{gpu_3dfft_sycl_rocfft.cpp}::PlanSetupData
- totalVirial()
: gmx::EnergyData
- totalVirial_
: gmx::test::anonymous_namespace{energyoutput.cpp}::EnergyOutputTest
- totNumThreadsIsAuto
: gmx_hw_opt_t
- toType()
: gmx::OptionInfo
- ToValue()
: gmx::KeyValueTreeTransformRuleBuilder::ToValue< FromType, ToType >
- tp
: MoleculePatch
- TprAndFileManager()
: gmx::test::TprAndFileManager
- tprName()
: gmx::test::TprAndFileManager
- TrajectoryAnalysisModule()
: gmx::TrajectoryAnalysisModule
- TrajectoryAnalysisModuleData
: gmx::TrajectoryAnalysisModule
, gmx::TrajectoryAnalysisModuleData
- TrajectoryAnalysisModuleDataBasic()
: gmx::anonymous_namespace{analysismodule.cpp}::TrajectoryAnalysisModuleDataBasic
- TrajectoryAnalysisRunnerCommon()
: gmx::TrajectoryAnalysisRunnerCommon
, gmx::TopologyInformation
- TrajectoryAnalysisSettings()
: gmx::TrajectoryAnalysisSettings
- TrajectoryComparison()
: gmx::test::TrajectoryComparison
- TrajectoryFileOpener()
: gmx::TrajectoryFileOpener
- TrajectoryFrame()
: gmx::TrajectoryFrame
- TrajectoryFrameReader()
: gmx::test::TrajectoryFrameReader
- trajectoryMatchSettings
: gmx::test::anonymous_namespace{rerun.cpp}::MdrunRerunTest
- trajectoryWriterSetup()
: gmx::ITrajectoryWriterClient
- trajectoryWriterTeardown()
: gmx::ITrajectoryWriterClient
- transferKind
: PmeGpuSettings
- transformationMatrixString_
: gmx::DensityFittingParameters
- transformationToDensityLattice()
: gmx::anonymous_namespace{densityfitting.cpp}::DensityFittingSimulationParameterSetup
, gmx::MrcDensityMapOfFloatFromFileReader
- transformationVariables
: pull_coord_work_t
- transformWith()
: gmx::KeyValueTreeTransformRuleBuilder::ToValue< FromType, ToType >
, gmx::KeyValueTreeTransformRuleBuilder::ToObject< FromType >
- TranslateAndScale()
: gmx::TranslateAndScale
- translation_
: gmx::MrcDensitySkewData
- translationString_
: gmx::DensityFittingParameters
- tri_bits
: anonymous_namespace{lincs.cpp}::Task
- triangle
: anonymous_namespace{lincs.cpp}::Task
- tric_shift
: t_pbc
- tric_vec
: t_pbc
- trimLeadingWhiteSpace_
: gmx::TextReader::Impl
- trimTrailingComment_
: gmx::TextReader::Impl
- trimTrailingWhiteSpace_
: gmx::TextReader::Impl
- tryCast()
: gmx::Any
- tryCastRef()
: gmx::Any
- tryConnect()
: gmx::ImdSession::Impl
- tryGetDataFrame()
: gmx::AnalysisDataStorage
, gmx::AbstractAnalysisData
- tryGetDataFrameInternal()
: gmx::AbstractAnalysisData
- tryStartOption()
: gmx::OptionsAssigner
- tstep
: gmx::IMDEnergyBlock
- tunePme
: gmx::MdrunOptions
- two_k_rf
: NBParamGpu
, cl_nbparam_params
- type
: gmx_molblock_t
, PdbAtomEntry
, gmx_ana_selmethod_t
, BondedInteractionList
, gmx_ana_selvalue_t
, SimulationParticle
, gmx::OptionInfo
, gmx_repl_ex
, gmx::SelectionTreeElement
, gmx::BuildMDModulesNotifier<>
, t_pargs
, gmx::BuildMDModulesNotifier< CurrentCallParameter, CallParameter...>
, nbnxn_atomdata_t::Params
, t_methoddata_pos
, gmx::SelectionParserSymbol
, gmx::test::anonymous_namespace{virtualsites.cpp}::VirtualSiteTest::VirtualSite
, gmx_ana_poscalc_t
, gmx::IMDHeader
, gmx::Any
, gmx::SelectionPosition
, MoleculePatch
, gmx::SelectionTreeElement
, gmx_ana_indexmap_t
, gmx::Selection
, gmx::internal::SelectionData
- type_
: gmx::SelectionParserValue
, gmx::SelectionParserSymbol::Impl
- typeA
: t_mdatoms
- typeB
: t_mdatoms
, SimulationParticle
- typeEnumValues
: gmx::PositionCalculationCollection
- typeFromEnum()
: gmx::PositionCalculationCollection
- typeMin
: t_oriresdata
- typeString()
: gmx::OptionStorageTemplate< T >
, gmx::FloatOptionStorage
, gmx::AbstractOptionStorage
, gmx::SelectionOptionStorage
, gmx::StringOptionStorage
, gmx::Int64OptionStorage
, gmx::IntegerOptionStorage
, anonymous_namespace{abstractoptionstorage.cpp}::MockOptionStorage
, gmx::EnumOptionStorage
, gmx::BooleanOptionStorage
, gmx::DoubleOptionStorage
, gmx::FileNameOptionStorage
, gmx::SelectionFileOptionStorage