- c -
- c
: t_pargs
, dd_corners_t
, gmx_kernel_timing_data_t
, wallcc_t
, t_nbparam
, gmx::CromerMannParameters
- C
: t_bb
- c1
: t_xpmelmt
- c2
: t_xpmelmt
- c_labelSize
: gmx::CrystallographicLabels
- c_numCorrelationBlocks
: gmx::CorrelationTensor
- c_numEigenRealsPerExperiment
: t_oriresdata
- c_numPointsPerSigma
: gmx::BiasGrid
- c_rf
: NBParamGpu
, cl_nbparam_params
- c_scopeCutoff
: gmx::BiasGrid
- CA
: t_bb
- cACC
: t_mdatoms
- cAcceleration_
: gmx::Update::Impl
- caches
: gmx::HardwareTopology::Machine
- calculationIntervalInSteps_
: gmx::DensityFittingParameters
- calcVirial
: gmx::test::anonymous_namespace{settle.cpp}::SettleTestParameters
- callback
: gmx::test::anonymous_namespace{textreader.cpp}::TextReaderTestParams
- callbackAfterReduction
: gmx::ObservablesReducerBuilder::Impl::Subscription
- callbackFromBuilder
: gmx::ObservablesReducerBuilder::Impl::Subscription
- callbacksAfterReduction_
: gmx::ObservablesReducer::Impl
- callbackToRequireReduction
: gmx::Lincs
- callbackToRequireReduction_
: gmx::LocalTopologyChecker::Impl
, gmx::test::anonymous_namespace{observablesreducer.cpp}::Subscriber
, ExclusionChecker::Impl
- canUseGpuAwareMpi
: gmx::DevelopmentFeatureFlags
- cartSetup_
: gmx::DomainDecompositionBuilder::Impl
- cBooleanNodeName
: gmx::test::TestReferenceChecker::Impl
- cc_
: SearchCycleCounting
- cCharNodeName
: gmx::test::TestReferenceChecker::Impl
- cdata
: gmx::SelectionTreeElement
- cell
: gmx_ga2la_t::Entry
, gmx::cellInfo
- cellAngles_
: gmx::MrcDensityMapHeader
- cellLength_
: gmx::MrcDensityMapHeader
- cells
: Nbnxm::GridSetData
- cellSize
: gmx::cellInfo
, Nbnxm::Grid::Dimensions
- cellSizeAlloc
: gmx::cellInfo
- cellSizesBuffer
: AtomDistribution
- cellSizeX
: gmx::DomdecOptions
- cellSizeY
: gmx::DomdecOptions
- cellSizeZ
: gmx::DomdecOptions
- cENER
: t_mdatoms
- center
: methoddata_insolidangle
, swap_group
- cfrac
: methoddata_insolidangle
- cFREEZE
: t_mdatoms
- cFREEZE_
: gmx::Update::Impl
- cg_gl
: t_state
- cg_p
: t_state
- cgnr
: PreprocessResidue
, MoleculePatch
- cgrp
: gmx::SelectionTreeElement
- channel_label
: swap_group
- chargeA
: gmx_pme_pp
, t_mdatoms
- chargeB
: t_mdatoms
- charges
: gmx::test::anonymous_namespace{pmegathertest.cpp}::TestSystem
, gmx::BenchmarkSystem
, gmx::test::anonymous_namespace{kernel_test.cpp}::TestSystem
- checker_
: gmx::test::anonymous_namespace{constr.cpp}::ConstraintsTest
, gmx::test::anonymous_namespace{energyoutput.cpp}::EnergyOutputTest
, gmx::test::anonymous_namespace{leapfrog.cpp}::LeapFrogTest
, gmx::test::anonymous_namespace{settle.cpp}::SettleTest
- checkpointedData_
: gmx::MDModulesCheckpointReadingDataOnMain
- checkpointingNotifier_
: gmx::MDModulesNotifiers
- checkpointOptions
: gmx::MdrunOptions
- child
: gmx::SelectionTreeElement
- ci
: gmx::AnalysisDataDisplacementModule::Impl
, nbnxn_ci_t
, NbnxnPairlistCpu
- cIdAttrName
: gmx::test::TestReferenceChecker::Impl
- cInt32NodeName
: gmx::test::TestReferenceChecker::Impl
- cInt64NodeName
: gmx::test::TestReferenceChecker::Impl
- cIntegerNodeName
: gmx::test::TestReferenceChecker::Impl
- ciOuter
: NbnxnPairlistCpu
- cj
: nbnxn_cj_t
, nbnxn_cj_packed_t
, NbnxnPairlistCpu
, NbnxnPairlistCpuWork
- cj_ind_end
: nbnxn_ci_t
- cj_ind_start
: nbnxn_ci_t
- cjOuter
: NbnxnPairlistCpu
- cjPacked
: Nbnxm::gpu_plist
- cjPacked_nalloc
: Nbnxm::gpu_plist
- cjPackedBegin
: nbnxn_sci
- cjPackedEnd
: nbnxn_sci
- classId
: gmx::HardwareTopology::Device
- clearGpuFBufferEarly
: gmx::StepWorkload
- clientsocket
: gmx::ImdSession::Impl
- cmakeGridSpacing
: InteractionsOfType
- cmap
: InteractionsOfType
- cmap_grid
: gmx_ffparams_t
- cmapAngles
: InteractionsOfType
- cmapAtomTypes
: InteractionsOfType
- cmpop
: t_methoddata_compare
- cmpt
: t_methoddata_compare
- cObjectType
: gmx::test::TestReferenceChecker::Impl
- code
: t_mapping
- coefficientsCapacity
: PmeGpuSpecific
- coefficientsSize
: PmeGpuSpecific
- coll
: gmx_ana_poscalc_t
- collection_
: gmx::SelectionOptionManager::Impl
- columnCounts_
: gmx::AbstractAnalysisData::Impl
- columnRowSectionStart_
: gmx::MrcDensityMapHeader
- columnRowSectionToXyz_
: gmx::MrcDensityMapHeader
- columns_
: gmx::TextTableFormatter::Impl
- colvarStateFile_
: gmx::ColvarsForceProviderState
- combineMtsForcesBeforeHaloExchange
: gmx::StepWorkload
- comm_
: gmx::PhysicalNodeCommunicator
- commandLineForMdrun_
: gmx::test::DensityFittingTest
- commentChar_
: gmx::TextReader::Impl
- commGuard_
: gmx::PhysicalNodeCommunicator
- common
: PmeGpu
- commRec_
: gmx::SimulatorEnv
- communicationBuffer_
: gmx::ObservablesReducer::Impl
, gmx::test::anonymous_namespace{observablesreducer.cpp}::Subscriber
- communicator_
: gmx::MDModulesCheckpointReadingBroadcast
- comp
: swap_group
- comp_from
: swap_group
- comp_now
: swap_group
- compareRootEntry_
: gmx::test::internal::TestReferenceDataImpl
, gmx::test::TestReferenceChecker::Impl
- compareto
: gmx_help_make_index_group
- comparisonSquaredSum
: gmx::anonymous_namespace{densityfit.cpp}::CrossCorrelationEvaluationHelperValues
- completionWriter_
: gmx::CommandLineHelpContext::Impl
- complexGrid_
: gmx::Gpu3dFft::Impl
- complexGridSize
: PmeGpuGridParams
, SolveKernelParams
, PmeGpuSpecific
- complexGridSizePadded
: PmeGpuGridParams
, SolveKernelParams
- compressed_symmetric
: gmx_sparsematrix
- computeDhdl
: gmx::StepWorkload
- computeEnergy
: gmx::StepWorkload
- computeForces
: gmx::StepWorkload
- computeListedForces
: gmx::StepWorkload
- computeMuTot
: gmx::SimulationWorkload
- computeNonbonded
: gmx::SimulationWorkload
- computeNonbondedAtMtsLevel1
: gmx::SimulationWorkload
- computeNonbondedForces
: gmx::StepWorkload
- computePmeOnSeparateRank
: gmx::StepWorkload
- computeSlowForces
: gmx::StepWorkload
- computeVirial
: gmx::StepWorkload
- computeVirial_
: gmx::ForceWithVirial
- computeVirialAndEnergy
: Nbnxm::KernelBenchOptions
- con_index
: gmx::Lincs
- constantEnsembleTemperature_
: gmx::EnsembleTemperature
- constants
: PmeGpuKernelParamsBase
- constEfl
: anonymous_namespace{edsam.cpp}::t_edflood
- constr
: anonymous_namespace{minimize.cpp}::EnergyEvaluator
, gmx::ConstraintsParam
- constr_
: gmx::LegacySimulatorData
- constraint_distance_squared
: gmx::shakedata
- constraintCommunicationRange
: gmx::DomdecOptions
- constraintRmsDeviation
: gmx::Lincs
- constraints_
: gmx::test::anonymous_namespace{energyoutput.cpp}::EnergyOutputTest
- constructingAtomIdx
: gmx::test::anonymous_namespace{virtualsites.cpp}::VirtualSiteTest::VirtualSite
- context_
: gmx::DeviceStreamManager::Impl
- convolveForce
: gmx::BiasParams
- coord_unit
: t_pullcoord
- coordinate_
: gmx::GaussianSpreadKernelParameters::PositionAndAmplitude
, gmx::RealFunctionvalueAtCoordinate
- coordinateManager_
: gmx::analysismodules::anonymous_namespace{msd.cpp}::MsdGroupData
- coordinates
: gmx::BenchmarkSystem
, gmx::test::anonymous_namespace{kernel_test.cpp}::TestSystem
, gmx::test::anonymous_namespace{pmegathertest.cpp}::TestSystem
- coordinates_
: gmx::test::BiasTest
, gmx::test::FrictionMetricTest
, gmx::OptimisationResult
- coordinatesComparison
: gmx::test::TrajectoryFrameMatchSettings
- coordsel
: UmbrellaOptions
- coordsendbuf
: gmx::ImdSession::Impl
- coordValue
: gmx::GridPoint
- copyAllOutputs
: PmeGpuSettings
- core_pinning_offset
: gmx_hw_opt_t
- core_pinning_stride
: gmx_hw_opt_t
- coreBits
: gmx::anonymous_namespace{cpuinfo.cpp}::ApicIdLayout
- coreIdInPackage
: gmx::CpuInfo::LogicalProcessor
- coreRankInPackage
: gmx::HardwareTopology::LogicalProcessor
- cores
: gmx::HardwareTopology::Package
- cORF
: t_mdatoms
- correlationGrid_
: gmx::test::FrictionMetricTest
- coulomb_tab
: NBParamGpu
- coulomb_tab_scale
: cl_nbparam_params
, NBParamGpu
- coulomb_tab_texobj
: NBParamGpu
- coulombKernelType
: gmx::test::anonymous_namespace{kernel_test.cpp}::KernelInputParameters
- coulombType
: gmx::test::anonymous_namespace{kernel_test.cpp}::KernelOptions
, Nbnxm::KernelBenchOptions
- count
: pme_setup_t
- countArray_
: gmx::analysismodules::anonymous_namespace{pairdist.cpp}::PairDistanceModuleData
- couplingTime
: gmx::TemperatureCouplingData
- couplingTimeStep
: gmx::TemperatureCouplingData
- covariance
: gmx::anonymous_namespace{densityfit.cpp}::CrossCorrelationEvaluationHelperValues
- cp0
: NbnxnPairlistCpu
, PairsearchWork
, NbnxnPairlistCpuWork
- cp1
: NbnxnPairlistCpuWork
, PairsearchWork
, NbnxnPairlistCpu
- Cprev
: t_bb
- cr
: anonymous_namespace{minimize.cpp}::EnergyEvaluator
- cr0
: dd_corners_t
- cr1
: dd_corners_t
- cr_
: gmx::ImdSession::Impl
, gmx::LocalTopologyChecker::Impl
, gmx::test::anonymous_namespace{energyoutput.cpp}::EnergyOutputTest
, ExclusionChecker::Impl
, gmx::ForceProviderInput
, gmx::DomainDecompositionBuilder::Impl
, gmx::LegacySimulatorData
- cRealNodeName
: gmx::test::TestReferenceChecker::Impl
- cSequenceLengthName
: gmx::test::TestReferenceChecker::Impl
- cSequenceType
: gmx::test::TestReferenceChecker::Impl
- cStringNodeName
: gmx::test::TestReferenceChecker::Impl
- csv
: gmx::BenchmarkSystem
- cTC
: t_mdatoms
- cTC_
: gmx::Update::Impl
- cU1
: t_mdatoms
- cU2
: t_mdatoms
- cUCharNodeName
: gmx::test::TestReferenceChecker::Impl
- cUInt32NodeName
: gmx::test::TestReferenceChecker::Impl
- cUInt64NodeName
: gmx::test::TestReferenceChecker::Impl
- cum
: t_UmbrellaWindow
- current
: PmeGpuKernelParamsBase
- currentFrame_
: gmx::internal::AnalysisDataHandleImpl
- currentLambdaState
: gmx::test::anonymous_namespace{freeenergyparameters.cpp}::FreeEnergyParameterTestParameters
- currentLifetimes_
: gmx::AnalysisDataLifetimeModule::Impl
- currentLocation
: gmx_sel_lexer_t
- currentOption_
: gmx::OptionsAssigner::Impl
- currentValueCount_
: gmx::OptionsAssigner::Impl
- currIndex_
: gmx::AnalysisDataModuleManager::Impl
- currsize
: gmx_sel_mempool_t
- currValues_
: gmx::AnalysisDataDisplacementModule::Impl
- cutoff
: t_methoddata_distance
- cVCM
: t_mdatoms
- cVectorType
: gmx::test::TestReferenceChecker::Impl
- cxy_ind
: NbnxmGpu
- cxy_na
: NbnxmGpu
- cycleCounter
: PairsearchWork
- cycleCounting_
: PairSearch
- cycles
: pme_setup_t
, gmx_pme_comm_vir_ene_t
- cyclesLastCpu
: BalanceRegion::Impl
- cyclesOpenCpu
: BalanceRegion::Impl
- cyclesPerPair
: Nbnxm::KernelBenchOptions