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gmx::ColvarsOptions Member List

This is the complete list of members for gmx::ColvarsOptions, including all inherited members.

buildMdpOutput(KeyValueTreeObjectBuilder *builder) const overridegmx::ColvarsOptionsvirtual
colvarsAtomCoords() const gmx::ColvarsOptions
colvarsConfigContent() const gmx::ColvarsOptions
colvarsEnsTemp() const gmx::ColvarsOptions
colvarsFileName() const gmx::ColvarsOptions
colvarsInputFiles() const gmx::ColvarsOptions
colvarsOutputPrefix() const gmx::ColvarsOptions
colvarsSeed() const gmx::ColvarsOptions
initMdpOptions(IOptionsContainerWithSections *options) overridegmx::ColvarsOptionsvirtual
initMdpTransform(IKeyValueTreeTransformRules *rules) overridegmx::ColvarsOptionsvirtual
isActive() const gmx::ColvarsOptions
processCoordinates(const CoordinatesAndBoxPreprocessed &coord)gmx::ColvarsOptions
processEdrFilename(const EdrOutputFilename &filename)gmx::ColvarsOptions
processTemperature(const EnsembleTemperature &temp)gmx::ColvarsOptions
processTopology(gmx_mtop_t *mtop)gmx::ColvarsOptions
readInternalParametersFromKvt(const KeyValueTreeObject &tree)gmx::ColvarsOptions
setLogger(const MDLogger &logger)gmx::ColvarsOptions
setParameters(const std::string &colvarsfile, const t_atoms &topology, ArrayRef< const RVec > coords, PbcType pbcType, const matrix boxValues, real temperature)gmx::ColvarsOptions
writeInternalParametersToKvt(KeyValueTreeObjectBuilder treeBuilder)gmx::ColvarsOptions
~IMdpOptionProvider() (defined in gmx::IMdpOptionProvider)gmx::IMdpOptionProviderinlineprotectedvirtual