Inheritance diagram for gmx::test::anonymous_namespace{extract_cluster.cpp}::ExtractClusterModuleTest:

Collaboration diagram for gmx::test::anonymous_namespace{extract_cluster.cpp}::ExtractClusterModuleTest:

Description

Test fixture for the convert-trj analysis module.

Public Member Functions
	ExtractClusterModuleTest ()
	Constructor.

void	compareFiles ()
	Compare generated files to expected ones.

Public Member Functions inherited from gmx::test::AbstractTrajectoryAnalysisModuleTestFixture
void	setTopology (const char *filename)
	Sets the topology file to use for the test. More...

void	setTrajectory (const char *filename)
	Sets the trajectory file to use for the test. More...

void	includeDataset (const char *name)
	Includes only specified dataset for the test. More...

void	excludeDataset (const char *name)
	Excludes specified dataset from the test. More...

void	setDatasetTolerance (const char *name, const FloatingPointTolerance &tolerance)
	Sets a custom tolerance for checking a dataset. More...

void	runTest (const CommandLine &args)
	Runs the analysis module with the given additional options. More...

void	runTestAnticipatingException (const CommandLine &args)
	Runs the analysis module with the given additional options. More...

Public Member Functions inherited from gmx::test::CommandLineTestBase
void	setInputFile (const char option, const char filename)
	Sets an input file. More...

void	setInputFile (const char *option, const std::string &filename)
	Sets an input file. More...

void	setModifiableInputFile (const char option, const char filename)
	Sets an input file that may be modified. The file is copied to a temporary file, which is used as the test input. More...

void	setModifiableInputFile (const char *option, const std::string &filename)
	Sets an input file that may be modified. The file is copied to a temporary file, which is used as the test input. More...

void	setInputFileContents (const char option, const char extension, const std::string &contents)
	Generates and sets an input file. More...

void	setInputFileContents (const char option, const char extension, const ArrayRef< const char *const > &contents)
	Generates and sets an input file. More...

std::string	setOutputFile (const char option, const char filename, const ITextBlockMatcherSettings &matcher)
	Sets an output file whose name is passed via an option and adds it to the set of tested files. More...

std::string	setOutputFile (const char option, const char filename, const IFileMatcherSettings &matcher)

std::string	setOutputFileWithGeneratedName (const std::string_view label, const std::filesystem::path &filename, const ITextBlockMatcherSettings &matcher)
	Sets an output file whose name is generated by the tool and adds it to the set of tested files. More...

std::string	setOutputFileWithGeneratedName (const std::string_view label, const std::filesystem::path &filename, const IFileMatcherSettings &matcher)

std::string	setInputAndOutputFile (const char option, const char filename, const ITextBlockMatcherSettings &matcher)
	Sets a file parameter that is used for input and modified as output. The input file is copied to a temporary file that is used as input and can be modified.

std::string	setInputAndOutputFile (const char option, const char filename, const IFileMatcherSettings &matcher)
	Sets a file parameter that is used for input and modified as output. The input file is copied to a temporary file that is used as input and can be modified. More...

CommandLine &	commandLine ()
	Returns the internal CommandLine object used to construct the command line for the test. More...

TestFileManager &	fileManager ()
	Returns the internal TestFileManager object used to manage the files. More...

TestReferenceChecker	rootChecker ()
	Returns the root reference data checker. More...

void	setDefaultTolerance (const FloatingPointTolerance &tolerance)
	Sets the tolerance for floating-point comparisons. More...

void	testWriteHelp (ICommandLineModule *module)
	Checks the output of writeHelp() against reference data.

void	checkOutputFiles ()
	Checks output files added with setOutputFile() against reference data. More...

Protected Member Functions
TrajectoryAnalysisModulePointer	createModule () override
	Constructs the analysis module to be tested.

The documentation for this class was generated from the following file:

src/gromacs/trajectoryanalysis/tests/extract_cluster.cpp

Description

Public Member Functions

Protected Member Functions