Here is a list of all documented class members with links to the class documentation for each member:

- o -

• O : t_bb
• objectHasDistinctProperties() : gmx::KeyValueTreeObjectBuilder
• observablesHistory_ : gmx::LegacySimulatorData
• observablesHistory_p : gmx::SimulatorStateData
• observablesReducer : gmx::test::anonymous_namespace{observablesreducer.cpp}::ObservablesReducerIntegrationTest::RankData
• ObservablesReducer() : gmx::ObservablesReducer
• observablesReducer : anonymous_namespace{minimize.cpp}::EnergyEvaluator
• ObservablesReducerBuilder : gmx::ObservablesReducer , gmx::ObservablesReducerBuilder
• observablesReducerBuilder_ : gmx::LegacySimulatorData , gmx::SimulatorEnv
• ObservablesReducerIntegrationTest() : gmx::test::anonymous_namespace{observablesreducer.cpp}::ObservablesReducerIntegrationTest
• ObsoleteToolModule() : anonymous_namespace{legacymodules.cpp}::ObsoleteToolModule
• occupancy() : PdbAtomEntry
• oenv : UmbrellaOptions , gmx::LegacyMdrunOptions
• oenv_ : gmx::LegacySimulatorData
• Offset() : gmx::Offset
• offset() : gmx::accessor_basic< ElementType >
• offset_policy : gmx::accessor_basic< ElementType >
• old_f_ind : gmx::ImdSession::Impl
• old_forces : gmx::ImdSession::Impl
• old_nforces : gmx::ImdSession::Impl
• oldval : gmx::AnalysisDataDisplacementModule::Impl
• omega : gmx::shakedata
• omega_ : gmx::test::anonymous_namespace{shake.cpp}::ShakeTest
• oname : MoleculePatch
• onlyAtoms() : gmx::SelectionOption
• onlySortedAtoms() : gmx::SelectionOption
• onlyStatic() : gmx::SelectionOption
• onTestEnd() : gmx::test::internal::TestReferenceDataImpl
• ooplace : gmx_fft_mkl
• openBeforeForceComputationCpu() : DDBalanceRegionHandler
• openBeforeForceComputationGpu() : DDBalanceRegionHandler
• openBiasOutputFile() : OutputFile
• openFile() : gmx::DataFileFinder
• openOutputFile() : gmx::ImdSession::Impl , gmx::TestParticleInsertion
• openRawHandle() : gmx::TextInputFile
• openTextOutputFile() : gmx::anonymous_namespace{fileredirector.cpp}::DefaultOutputRedirector , gmx::IFileOutputRedirector , gmx::test::TestFileOutputRedirector
• openTimingRegion() : GpuRegionTimerWrapper< GpuRegionTimerImpl > , GpuRegionTimerImpl
• operator AnalysisNeighborhoodPositions() : gmx::Selection , gmx::SelectionPosition
• operator bool() : gmx::SimulationInputHandle , gmx::BoolType , gmx::LogWriteHelper , gmx::LogLevelHelper , gmx::test::TestReferenceChecker
• operator cl_type() : gmx::ClHandle< cl_type >
• operator const int &() : gmx::Offset
• operator const RawArray &() : gmx::BasicVector< ValueType >
• operator const real &() : gmx::TimeStep
• operator const std::string &() : gmx::PropagatorTag
• operator double() : gmx::SimdSetZeroProxy
• operator float() : gmx::SimdSetZeroProxy
• operator int() : gmx::test::NumRanksPerSimulation
• operator LogWriteHelper() : gmx::LogLevelHelper
• operator RawArray &() : gmx::BasicVector< ValueType >
• operator Simd4Double() : gmx::SimdSetZeroProxy
• operator Simd4Float() : gmx::SimdSetZeroProxy
• operator SimdDInt32() : gmx::SimdSetZeroProxy
• operator SimdDouble() : gmx::SimdSetZeroProxy
• operator SimdFInt32() : gmx::SimdSetZeroProxy
• operator SimdFloat() : gmx::SimdSetZeroProxy
• operator std::int32_t() : gmx::SimdSetZeroProxy
• operator T() : gmx::Range< typename >::iterator
• operator T &() : gmx::Range< typename >::iterator
• operator unsigned int() : gmx::test::MaxNumFrames
• operator!=() : gmx::PropagatorTag , gmx::ExponentialDistribution< RealType >::param_type , gmx::ExponentialDistribution< RealType > , gmx::GammaDistribution< RealType >::param_type , gmx::GammaDistribution< RealType > , gmx::NormalDistribution< RealType >::param_type , gmx::NormalDistribution< RealType > , gmx::TabulatedNormalDistribution< RealType, tableBits >::param_type , gmx::TabulatedNormalDistribution< RealType, tableBits > , gmx::ThreeFry2x64General< rounds, internalCounterBits > , gmx::UniformIntDistribution< IntType >::param_type , gmx::UniformIntDistribution< IntType > , gmx::UniformRealDistribution< RealType >::param_type , gmx::UniformRealDistribution< RealType > , gmx::BasicVector< ValueType > , gmx::Selection , StringTableEntry , gmx::Range< typename >::iterator
• operator&() : gmx::FlagsTemplate< FlagType >
• operator()() : gmx::test::NameOfTestFromTuple< ParametersTuple > , gmx::test::RefDataFilenameMaker< ParametersTuple > , gmx::test::anonymous_namespace{naming.cpp}::FormatFunctorForInt , gmx::StringFormatter , gmx::IdentityFormatter , gmx::functor_wrapper< T, D > , gmx::test::anonymous_namespace{mock_datamodule.cpp}::StaticDataFrameHeaderChecker , gmx::test::anonymous_namespace{mock_datamodule.cpp}::StaticDataPointsChecker , gmx::test::anonymous_namespace{mock_datamodule.cpp}::DataStorageRequester , gmx::test::anonymous_namespace{mock_datamodule.cpp}::StaticDataPointsStorageChecker , gmx::DensityFittingAmplitudeLookup , gmx::anonymous_namespace{densityfit.cpp}::CrossCorrelationGradientAtVoxel , gmx::TranslateAndScale , gmx::AffineTransformation , gmx::OuterProductEvaluator , gmx::MultiDimArray< TContainer, Extents, LayoutPolicy > , gmx::layout_right::mapping< Extents > , gmx::basic_mdspan< ElementType, Extents, LayoutPolicy, AccessorPolicy > , gmx::ExponentialDistribution< RealType > , gmx::GammaDistribution< RealType > , gmx::NormalDistribution< RealType > , gmx::TabulatedNormalDistribution< RealType, tableBits > , gmx::ThreeFry2x64General< rounds, internalCounterBits > , gmx::UniformIntDistribution< IntType > , gmx::UniformRealDistribution< RealType > , gmx::anonymous_namespace{nbsearch.cpp}::MindistAction , gmx::pairHash , gmx::StringCompare , gmx::no_delete< T > , gmx::test::EnergyComparison , gmx::test::TrajectoryComparison
• operator*() : gmx::SelectionParserSymbolIterator , AtomIterator , IListIterator , StringTableEntry , gmx::EnumerationIterator< EnumType, Last, Step > , gmx::Range< typename >::iterator
• operator*=() : gmx::BasicVector< ValueType >
• operator+() : gmx::BasicVector< ValueType >
• operator++() : gmx::compat::not_null< T > , gmx::SelectionParserSymbolIterator , AtomIterator , IListIterator , gmx::Range< typename >::iterator
• operator+=() : gmx::BasicVector< ValueType > , gmx::EnumerationIterator< EnumType, Last, Step >
• operator-() : gmx::BasicVector< ValueType > , gmx::EnumerationIterator< EnumType, Last, Step >
• operator-=() : gmx::BasicVector< ValueType >
• operator->() : StringTableEntry
• operator/() : gmx::BasicVector< ValueType >
• operator/=() : gmx::BasicVector< ValueType >
• operator<< : gmx::test::anonymous_namespace{bonded.cpp}::iListInput
• operator=() : gmx::DensityFittingAmplitudeLookup , gmx::CommandLineHelpContext , gmx::LocalTopologyChecker , PreprocessingAtomTypes , GpuRegionTimerImpl , gmx::ClHandle< cl_type > , gmx::GaussTransform3D::Impl , gmx::ArrayRefWithPadding< typename > , gmx::TranslateAndScale , gmx::DensitySimilarityMeasure , gmx::DensityFittingForce , gmx::GaussianOn1DLattice , StringTableEntry , gmx::GaussianOn1DLattice , gmx::GaussTransform3D , SimulationParticle , gmx::MultiDimArray< TContainer, Extents, LayoutPolicy > , gmx::PaddedVector< T, Allocator > , gmx::test::TestReferenceChecker , gmx::PaddedVector< T, Allocator > , gmx::MembedHolder , gmx::detail::extents_analyse< R, E0, StaticExtents...> , gmx::detail::extents_analyse< R, dynamic_extent, StaticExtents...> , gmx::extents< StaticExtents > , gmx::Site , gmx::extents< StaticExtents > , gmx::layout_right::mapping< Extents > , gmx::GpuPairlistSorting , gmx::basic_mdspan< ElementType, Extents, LayoutPolicy, AccessorPolicy > , gmx::AwhParams , gmx::ForceBuffersView , gmx::ForceBuffers , gmx::ObservablesReducerBuilder , gmx::ObservablesReducer , gmx::GpuPairlistSorting , gmx::GpuPairlist , gmx::SelectionParserSymbolIterator , gmx::Any , gmx::KeyValueTreeTransformRulesScoped , gmx::KeyValueTreeTransformRuleBuilder , gmx::LogWriteHelper , gmx::LoggerOwner , gmx::test::TestReferenceChecker , gmx::BasicVector< ValueType > , SimulationParticle , StringTable , StringTableEntry , gmx_moltype_t
• operator==() : IListIterator , gmx::GammaDistribution< RealType > , gmx::TabulatedNormalDistribution< RealType, tableBits > , gmx::nbnxn_excl_t , gmx::HostAllocationPolicy , gmx::PropagatorTag , gmx::nbnxn_sci_t , gmx::nbnxn_im_ei_t , gmx::nbnxn_cj_packed_t , gmx::ExponentialDistribution< RealType >::param_type , gmx::ExponentialDistribution< RealType > , gmx::GammaDistribution< RealType >::param_type , gmx::NormalDistribution< RealType >::param_type , gmx::NormalDistribution< RealType > , gmx::TabulatedNormalDistribution< RealType, tableBits >::param_type , gmx::ThreeFry2x64General< rounds, internalCounterBits > , gmx::UniformIntDistribution< IntType >::param_type , gmx::UniformIntDistribution< IntType > , gmx::UniformRealDistribution< RealType >::param_type , gmx::UniformRealDistribution< RealType > , gmx::SelectionParserSymbolIterator , AtomIterator , gmx::BasicVector< ValueType > , gmx::Selection , StringTableEntry
• operator[]() : gmx::analysismodules::anonymous_namespace{msd.cpp}::MsdData , gmx::FixedCapacityVector< typename, size_t > , gmx::KeyValueTreePath , gmx::KeyValueTreeObjectBuilder , gmx::BasicVector< ValueType > , gmx::ArrayRef< typename > , gmx::EnumerationArray< EnumType, DataType, ArraySize > , gmx::ListOfLists< typename > , StringTable , gmx::PaddedVector< T, Allocator > , gmx::internal::SimdArrayRef< T > , gmx::PaddedVector< T, Allocator > , gmx::basic_mdspan< ElementType, Extents, LayoutPolicy, AccessorPolicy >
• operator|() : gmx::FlagsTemplate< FlagType >
• operator|=() : gmx::FlagsTemplate< FlagType >
• operator~() : gmx::FlagsTemplate< FlagType >
• opt : t_filenm
• option() : gmx::OptionInfo , t_pargs
• OptionInfo() : gmx::OptionInfo
• optionInfo() : gmx::BooleanOptionStorage , gmx::FloatOptionStorage , gmx::EnumOptionStorage , gmx::test::anonymous_namespace{abstractoptionstorage.cpp}::MockOptionStorage , gmx::Int64OptionStorage , gmx::AbstractOptionStorage , gmx::DoubleOptionStorage , gmx::SelectionOptionStorage , gmx::FileNameOptionStorage , gmx::SelectionFileOptionStorage , gmx::StringOptionStorage , gmx::IntegerOptionStorage
• OptionList : gmx::SelectionOptionManager::Impl , gmx::internal::OptionSectionImpl::Group
• OptionMap : gmx::internal::OptionSectionImpl
• optionMap_ : gmx::internal::OptionSectionImpl
• options() : gmx::CommandLineCommonOptionsHolder
• Options() : gmx::Options
• options() : gmx_reverse_top_t
• options_ : gmx::CommandLineHelpWriter::Impl , gmx::DomainDecompositionBuilder::Impl , gmx::SelectionOptionManager::Impl , gmx::test::FlagTest , gmx::internal::OptionSectionImpl::Group , gmx::OptionsAssigner::Impl
• OptionsAdapter() : gmx::anonymous_namespace{pargs.cpp}::OptionsAdapter
• OptionsAssigner() : gmx::OptionsAssigner , gmx::Options
• OptionsBehaviorCollection() : gmx::OptionsBehaviorCollection
• OptionSection() : gmx::OptionSection
• OptionSectionHandle() : gmx::OptionSectionHandle
• OptionSectionImpl() : gmx::internal::OptionSectionImpl
• OptionsFilter() : gmx::anonymous_namespace{cmdlinehelpwriter.cpp}::OptionsFilter
• optionsFinished() : gmx::ICommandLineOptionsModule , gmx::TrajectoryAnalysisRunnerCommon , gmx::TimeUnitBehavior , gmx::TrajectoryAnalysisModule , gmx::SelectionOptionBehavior , gmx::analysismodules::anonymous_namespace{rdf.cpp}::Rdf , gmx::IOptionsBehavior , gmx::analysismodules::Msd , gmx::OptionsBehaviorCollection
• optionsFinishing() : gmx::TimeUnitBehavior , gmx::SelectionOptionBehavior , gmx::IOptionsBehavior , gmx::OptionsBehaviorCollection
• OptionsIterator() : gmx::OptionsIterator
• OptionsListFormatter() : gmx::anonymous_namespace{cmdlinehelpwriter.cpp}::OptionsListFormatter
• OptionsModifyingIterator() : gmx::OptionsModifyingIterator
• optionsModuleSettings_ : gmx::TrajectoryAnalysisSettings::Impl
• OptionStorageTemplate() : gmx::OptionStorageTemplate< T >
• OptionStorageTemplate< T > : gmx::OptionTemplate< T, U >
• OptionStorageTemplateSimple() : gmx::OptionStorageTemplateSimple< T >
• OptionTemplate() : gmx::OptionTemplate< T, U >
• Oracle : gmx::CpuInfo
• orderTensors : t_oriresdata
• organizeMdpFile() : gmx::test::MultiSimTest
• orgid : gmx_ana_indexmap_t
• orientations : t_oriresdata
• orientationsEnsembleAv : t_oriresdata
• orientationsEnsembleAvBuffer : t_oriresdata
• orientationsTimeAndEnsembleAv : t_oriresdata
• orientationsTimeAndEnsembleAvBuffer : t_oriresdata
• orientedLength() : gmx::NelderMeadSimplex
• origin() : gmx::GridAxis
• orire_Dtav : history_t
• orire_initf : history_t
• osId : gmx::CpuInfo::LogicalProcessor , gmx::anonymous_namespace{cpuinfo.cpp}::ApicInfo , gmx::HardwareTopology::LogicalProcessor , gmx::HardwareTopology::ProcessingUnit
• osIdToPuId : gmx::HardwareTopology::Machine
• out_angles : gmx_enfrot
• out_rot : gmx_enfrot
• out_slabs : gmx_enfrot
• out_torque : gmx_enfrot
• outerProductZY_ : gmx::GaussTransform3D::Impl , gmx::DensityFittingForce::Impl
• outf : gmx::ImdSession::Impl
• outinit : gmx_ana_selmethod_t
• OutputAdapterContainer() : gmx::OutputAdapterContainer
• outputBuffer() : gmx::nbnxn_atomdata_t
• outputBuffers() : gmx::nbnxn_atomdata_t
• outputEnv_ : gmx::SimulatorEnv
• outputFile() : gmx::FileNameOption , gmx::NbnxmKernelBenchOptions
• OutputFile() : OutputFile
• outputFile() : gmx::TrajectoryFileOpener , gmx::HelpWriterContext
• outputFiles : gmx::anonymous_namespace{handlerestart.cpp}::StartingBehaviorHandler
• outputForces() : gmx::ImdSession::Impl
• outputFormat() : gmx::HelpWriterContext
• outputProvider() : gmx::MDModules , gmx::RestraintMDModule , gmx::IMDModule , gmx::anonymous_namespace{plumedMDModule_stub.cpp}::PlumedMDModule , gmx::anonymous_namespace{nnpot.cpp}::NNPotMDModule , gmx::anonymous_namespace{densityfitting.cpp}::DensityFitting , gmx::anonymous_namespace{colvarsMDModule.cpp}::ColvarsMDModule , gmx::anonymous_namespace{qmmm.cpp}::QMMM , gmx::anonymous_namespace{colvarsMDModule_stub.cpp}::ColvarsMDModule , gmx::anonymous_namespace{electricfield.cpp}::ElectricField , gmx::anonymous_namespace{plumedMDModule.cpp}::PlumedMDModule
• outputProvider_ : gmx::LegacySimulatorData
• outputRootEntry_ : gmx::test::TestReferenceChecker::Impl , gmx::test::internal::TestReferenceDataImpl
• OutputSelector() : gmx::OutputSelector
• outputStream() : gmx::test::InteractiveTestHelper
• outputTempDirectory_ : gmx::test::TestFileManager::Impl
• overlapRecvCapacity : PmeGpuHaloExchange
• overlapRecvSize : PmeGpuHaloExchange
• overlapSendCapacity : PmeGpuHaloExchange
• overlapSendSize : PmeGpuHaloExchange
• overrideSourceRoot() : gmx::test::anonymous_namespace{testinit.cpp}::TestProgramContext
• ow1() : gmx::SettleData , WaterMolecule