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- d -
data() :
gmx::AwhEnergyBlock
,
gmx::PaddedVector< T, Allocator >
,
gmx::FixedCapacityVector< typename, size_t >
,
gmx::EnumerationArray< EnumType, DataType, ArraySize >
,
gmx::FixedCapacityVector< typename, size_t >
,
gmx::basic_mdspan< ElementType, Extents, LayoutPolicy, AccessorPolicy >
,
gmx::ArrayRef< typename >
,
gmx::EnumerationArray< EnumType, DataType, ArraySize >
DataFileFinder() :
gmx::DataFileFinder
DataFileInfo() :
gmx::DataFileInfo
DataFileOptions() :
gmx::DataFileOptions
dataFinished() :
gmx::AnalysisDataModuleSerial
,
gmx::AnalysisDataModuleParallel
,
gmx::AnalysisDataAverageModule
,
gmx::AnalysisDataFrameAverageModule
,
gmx::AnalysisDataDisplacementModule
,
gmx::AnalysisDataSimpleHistogramModule
,
gmx::AnalysisDataWeightedHistogramModule
,
gmx::AnalysisDataBinAverageModule
,
gmx::AnalysisDataProxy
,
gmx::AnalysisDataLifetimeModule
,
gmx::AbstractPlotModule
,
gmx::internal::BasicAverageHistogramModule
,
gmx::analysismodules::anonymous_namespace{select.cpp}::IndexFileWriterModule
,
gmx::IAnalysisDataModule
dataHandle() :
gmx::TrajectoryAnalysisModuleData
dataID() :
gmx::MttkData
,
gmx::MttkPropagatorConnection
,
gmx::NoseHooverChainsData
dataPropertyAboutToChange() :
gmx::AnalysisDataModuleManager
dataSet() :
gmx::AnalysisDataFrameLocalDataHandle< ValueType >
datasetCount() :
gmx::TrajectoryAnalysisModule
dataSetCount() :
gmx::AnalysisDataFrameLocalDataHandle< ValueType >
,
gmx::test::AnalysisDataTestInput
,
gmx::AbstractAnalysisData
datasetFromIndex() :
gmx::TrajectoryAnalysisModule
datasetFromName() :
gmx::TrajectoryAnalysisModule
dataSetIndex() :
gmx::test::AnalysisDataTestInputPointSet
,
gmx::AnalysisDataPointSetRef
datasetNames() :
gmx::TrajectoryAnalysisModule
dataStarted() :
gmx::AnalysisDataProxy
,
gmx::internal::BasicAverageHistogramModule
,
gmx::analysismodules::anonymous_namespace{select.cpp}::IndexFileWriterModule
,
gmx::IAnalysisDataModule
,
gmx::AnalysisDataModuleSerial
,
gmx::AnalysisDataAverageModule
,
gmx::AnalysisDataFrameAverageModule
,
gmx::AnalysisDataDisplacementModule
,
gmx::AnalysisDataBinAverageModule
,
gmx::AnalysisDataLifetimeModule
,
gmx::AbstractPlotModule
DataStorageRequester() :
gmx::test::anonymous_namespace{mock_datamodule.cpp}::DataStorageRequester
DDBalanceRegionHandler() :
DDBalanceRegionHandler
deallocate() :
gmx::Allocator< T, AllocationPolicy >
deallocateComplexGrid() :
gmx::Gpu3dFft::Impl
debugLevel() :
gmx::CommandLineCommonOptionsHolder
decay() :
gmx::accessor_basic< ElementType >
decideIfCheckpointingThisStep() :
gmx::CheckpointHandler
defaultBasename() :
gmx::FileNameOption
defaultEnergyTermsToCompare() :
gmx::test::EnergyComparison
defaultEnumIndex() :
gmx::StringOption
defaultExtension() :
gmx::FileNameOptionStorage
,
gmx::FileNameOptionInfo
defaultFloatTolerance() :
gmx::test::FloatingPointTolerance
defaultNiceLevel() :
gmx::CommandLineModuleSettings
defaultRealTolerance() :
gmx::test::FloatingPointTolerance
defaultRealUlpTol() :
gmx::test::SimdBaseTest
defaultSelectionText() :
gmx::SelectionOption
defaultType() :
gmx::FileNameOption
defaultValue() :
gmx::BooleanOptionStorage
,
gmx::OptionTemplate< T, U >
,
gmx::BooleanOptionInfo
defaultValueIfSet() :
gmx::OptionTemplate< T, U >
defaultValueIfSetExists() :
gmx::AbstractOptionStorage
defaultValues() :
gmx::AbstractOptionStorage
,
gmx::OptionStorageTemplate< T >
,
gmx::SelectionFileOptionStorage
,
gmx::OptionInfo
defaultValuesAsStrings() :
gmx::AbstractOptionStorage
,
gmx::OptionStorageTemplate< T >
,
gmx::SelectionFileOptionStorage
,
gmx::OptionInfo
deform() :
gmx::Update
deltaH() :
ForeignLambdaTerms
densityDataCopy() :
gmx::MrcDensityMapOfFloatFromFileReader
DensityFitting() :
gmx::anonymous_namespace{densityfitting.cpp}::DensityFitting
DensityFittingAmplitudeLookup() :
gmx::DensityFittingAmplitudeLookup
DensityFittingForce() :
gmx::DensityFittingForce
DensityFittingForceProvider() :
gmx::DensityFittingForceProvider
DensitySimilarityCrossCorrelation() :
gmx::anonymous_namespace{densityfit.cpp}::DensitySimilarityCrossCorrelation
DensitySimilarityInnerProduct() :
gmx::anonymous_namespace{densityfit.cpp}::DensitySimilarityInnerProduct
DensitySimilarityMeasure() :
gmx::DensitySimilarityMeasure
DensitySimilarityRelativeEntropy() :
gmx::anonymous_namespace{densityfit.cpp}::DensitySimilarityRelativeEntropy
DescribeNegationTo() :
gmx::test::RVecMatcher< FloatType >
,
gmx::test::FloatTypeMatcher< FloatType >
DescribeTo() :
gmx::test::FloatTypeMatcher< FloatType >
,
gmx::test::RVecMatcher< FloatType >
description() :
gmx::SelectionOptionManager::Impl::SelectionRequest
,
gmx::AbstractOptionStorage
,
gmx::test::TestDevice
,
gmx::OptionTemplate< T, U >
deserialize() :
gmx::ReadCheckpointDataHolder
detect() :
gmx::CpuInfo
,
gmx::HardwareTopology
deviceContext() :
gmx::test::TestDevice
deviceIdsAssigned() :
gmx::GpuTaskAssignments
deviceInfo() :
gmx::DeviceStreamManager
,
gmx::test::TestDevice
deviceStream() :
gmx::test::TestDevice
DeviceStream() :
DeviceStream
DeviceStreamManager() :
gmx::DeviceStreamManager
didOutput() :
gmx::TextTableFormatter
dimensions() :
Nbnxm::Grid
dimParams() :
gmx::Bias
DirectoryEnumerator() :
gmx::DirectoryEnumerator
disableForDomainIfAnyPpRankHasCpuForces() :
gmx::MdGpuGraph::Impl
disableInputOptionChecking() :
gmx::FileNameOptionManager
disablePmeRanks() :
gmx::SeparatePmeRanksPermitted
disableUnusedEntriesCheck() :
gmx::test::TestReferenceChecker
discard() :
gmx::ThreeFry2x64General< rounds, internalCounterBits >
disconnectClient() :
gmx::ImdSession::Impl
dispatchFreeEnergyKernels() :
FreeEnergyDispatch
,
nonbonded_verlet_t
dispatchNonbondedKernel() :
nonbonded_verlet_t
dispatchPruneKernel() :
PairlistSet
,
PairlistSets
dispatchPruneKernelCpu() :
nonbonded_verlet_t
dispatchPruneKernelGpu() :
nonbonded_verlet_t
displayName() :
gmx::anonymous_namespace{programcontext.cpp}::DefaultProgramContext
,
gmx::IProgramContext
,
gmx::test::anonymous_namespace{testinit.cpp}::TestProgramContext
,
gmx::CommandLineProgramContext
distance2() :
gmx::AnalysisNeighborhoodPair
doBool() :
gmx::ISerializer
,
gmx::FileIOXdrSerializer
doBoolArray() :
gmx::ISerializer
doChar() :
gmx::FileIOXdrSerializer
doCharArray() :
gmx::FileIOXdrSerializer
doCheckpoint() :
df_history_t
,
ekinstate_t
,
gmx::NoseHooverGroup
doCheckpointData() :
gmx::NoseHooverTemperatureCoupling
doDouble() :
gmx::FileIOXdrSerializer
doEnumArrayAsInt() :
gmx::ISerializer
doEnumAsInt() :
gmx::ISerializer
doFloat() :
gmx::FileIOXdrSerializer
doInt() :
gmx::FileIOXdrSerializer
doInt32() :
gmx::FileIOXdrSerializer
doInt64() :
gmx::FileIOXdrSerializer
doIvec() :
gmx::FileIOXdrSerializer
doListedForcesSorting() :
gmx_reverse_top_t
DomainDecompositionBuilder() :
gmx::DomainDecompositionBuilder
DomainInfo() :
gmx::DomainInfo
domainSetup() :
Nbnxm::GridSet
DomainSetup() :
Nbnxm::GridSet::DomainSetup
DomDecHelper() :
gmx::DomDecHelper
doMdrun() :
gmx::test::PeriodicActionsTest
doMembed() :
gmx::MembedHolder
done() :
gmx::AbstractAverageHistogram
doOpaque() :
gmx::FileIOXdrSerializer
doPmeLoadBalancing() :
gmx::PmeLoadBalanceHelper
doReal() :
gmx::FileIOXdrSerializer
doRvec() :
gmx::FileIOXdrSerializer
doRvecArray() :
gmx::FileIOXdrSerializer
doSimulationWork() :
gmx::test::anonymous_namespace{observablesreducer.cpp}::Subscriber
doSkippedUpdatesForAllPoints() :
gmx::Bias
,
gmx::BiasState
doSkippedUpdatesInNeighborhood() :
gmx::BiasState
doString() :
gmx::FileIOXdrSerializer
dot() :
gmx::BasicVector< ValueType >
doubleBlockLength() :
gmx::CorrelationBlockData
DoubleOption() :
gmx::DoubleOption
DoubleOptionInfo() :
gmx::DoubleOptionInfo
DoubleOptionStorage() :
gmx::DoubleOptionStorage
doUChar() :
gmx::FileIOXdrSerializer
doUCharArray() :
gmx::FileIOXdrSerializer
doUShort() :
gmx::FileIOXdrSerializer
DTensorsTimeAveragedHistory() :
t_oriresdata
dump() :
gmx::ReadCheckpointDataHolder
dvdl() :
gmx::ThreadForceBuffer< ForceBufferElementType >
dx() :
gmx::AnalysisDataFrameHeader
,
gmx::AnalysisDataPointSetRef
,
gmx::AnalysisNeighborhoodPair
,
gmx::AnalysisDataFrameRef
,
gmx::test::AnalysisDataTestInputFrame
dy() :
gmx::AnalysisDataPointSetRef
,
gmx::AnalysisDataFrameRef
dynamicMask() :
gmx::SelectionOption
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