Gromacs
2025-dev-20240516-46ce888
Main Page
Modules
Other Docs
Namespaces
Classes
Files
Examples
Class List
Class Index
Class Hierarchy
Class Members
All
Functions
Variables
Typedefs
Enumerations
Enumerator
Related Functions
a
b
c
d
e
f
g
h
i
j
k
l
m
n
o
p
q
r
s
t
u
v
w
x
y
z
All
Classes
Namespaces
Files
Functions
Variables
Typedefs
Enumerations
Enumerator
Friends
Macros
Groups
Pages
- d -
d2a :
gmx::analysismodules::anonymous_namespace{sasa.cpp}::t_conect
d2b :
gmx::analysismodules::anonymous_namespace{sasa.cpp}::t_conect
d3 :
t_bb
d4 :
t_bb
d5 :
t_bb
d_cell :
gmx::cellInfo
d_coefficients :
PmeGpuAtomParams
d_coordinates :
PmeGpuAtomParams
d_dtheta :
PmeGpuAtomParams
d_fftComplexGrid :
PmeGpuGridParams
d_fftRealGrid :
PmeGpuSpecific
d_forces :
PmeGpuAtomParams
d_fractShiftsTable :
PmeGpuGridParams
d_gridlineIndices :
PmeGpuAtomParams
d_gridlineIndicesTable :
PmeGpuGridParams
d_realGrid :
PmeGpuGridParams
d_recvGrids :
PmeGpuHaloExchange
d_rollingPruningPart :
Nbnxm::gpu_plist
d_rollingPruningPart_size :
Nbnxm::gpu_plist
d_rollingPruningPart_size_alloc :
Nbnxm::gpu_plist
d_sendGrids :
PmeGpuHaloExchange
d_splineModuli :
PmeGpuGridParams
d_theta :
PmeGpuAtomParams
d_virialAndEnergy :
PmeGpuConstParams
data :
gmx_sparsematrix
,
gmx_enfrot
,
t_forcetable
data_ :
gmx::GaussTransform3D::Impl
,
anonymous_namespace{indexutil.cpp}::IndexBlockTest
,
gmx::internal::AnalysisDataHandleImpl
,
gmx::internal::AnalysisDataStorageImpl
,
gmx::MrcDensityMapOfFloatReader::Impl
,
gmx::MrcDensityMapOfFloatWriter::Impl
dataMode_ :
gmx::MrcDensityMapHeader
datasetNames_ :
gmx::TrajectoryAnalysisModule::Impl
datasets_ :
gmx::TrajectoryAnalysisModule::Impl
dataStatistics_ :
gmx::MrcDensityMapHeader
db :
AtomProperty
dd_nc :
CheckpointHeaderContents
ddBondedChecking :
gmx::DomdecOptions
ddBondedChecking_ :
ReverseTopOptions
ddbox_ :
gmx::DomainDecompositionBuilder::Impl
ddBoxIsDynamic :
UnitCellInfo
ddCellIndex_ :
gmx::DomainDecompositionBuilder::Impl
ddDimensions :
DDGridSetup
ddGridSetup_ :
gmx::DomainDecompositionBuilder::Impl
ddist :
gmx::Lincs
ddp_count :
t_state
ddp_count_cg_gl :
t_state
ddpCountPairSearch :
anonymous_namespace{minimize.cpp}::EnergyEvaluator
ddRankSetup_ :
gmx::DomainDecompositionBuilder::Impl
ddSettings_ :
gmx::DomainDecompositionBuilder::Impl
debug :
gmx::MDLogger
debugLevel_ :
gmx::SelectionCollection::Impl
def :
AtomProperty
defaultFileName_ :
gmx::FileNameOptionManager::Impl
defaultNstImd :
gmx::ImdSession::Impl
defaultTolerance :
gmx::CubicSplineTable
,
gmx::QuadraticSplineTable
defaultTolerance_ :
gmx::test::TestReferenceChecker::Impl
defining_atomnames :
gmx_help_make_index_group
deform :
gmx::BoxDeformationHandle
deform_ :
gmx::LegacySimulatorData
degangle :
gmx_potfit
,
gmx_enfrotgrp
dekindl :
ekinstate_t
delta :
gmx::shakedata
delta_t :
gmx::SimulationTimeStep
deltaF :
anonymous_namespace{edsam.cpp}::t_edflood
deltaF0 :
anonymous_namespace{edsam.cpp}::t_edflood
deltaLambda :
gmx::test::anonymous_namespace{freeenergyparameters.cpp}::FreeEnergyParameterTestParameters
deltaQ :
t_swap
derivative :
gmx::AnalyticalSplineTableInput
,
gmx::NumericalSplineTableInput
desc :
t_pargs
,
t_mapping
,
gmx::AnalyticalSplineTableInput
,
gmx::NumericalSplineTableInput
description :
gmx::anonymous_namespace{gpu_3dfft_sycl_rocfft.cpp}::RocfftPlan
destinations :
gmx_repl_ex
dev :
gmx::HardwareTopology::Device
dev_rundata :
NbnxmGpu
deviceContext_ :
PmeGpuProgramImpl
,
PmeGpuSpecific
,
NbnxmGpu
deviceDetectionWarnings_ :
gmx::DeviceDetectionResult
deviceId :
gmx::HardwareTopology::Device
deviceId_ :
gmx::GpuTaskMapping
deviceInfoList_ :
gmx::DeviceDetectionResult
devices :
gmx::HardwareTopology::Machine
devicesSelectedByUser :
gmx_hw_opt_t
deviceStreams :
NbnxmGpu
deviceVendor :
DeviceInformation
dfhist :
t_state
dhdlambda :
anonymous_namespace{lincs.cpp}::Task
dHH :
SettleWaterTopology
diagonal_2xnn_j_minus_i :
nbnxn_atomdata_t::SimdMasks
diagonal_4xn_j_minus_i :
nbnxn_atomdata_t::SimdMasks
didPairlistH2D :
Nbnxm::GpuTimers::Interaction
,
NbnxmGpu
didPrune :
Nbnxm::GpuTimers::Interaction
,
NbnxmGpu
didRollingPrune :
NbnxmGpu
,
Nbnxm::GpuTimers::Interaction
diffusionCoefficient :
gmx::analysismodules::anonymous_namespace{msd.cpp}::MoleculeData
,
gmx::analysismodules::anonymous_namespace{msd.cpp}::MsdGroupData
dihedrals :
AllVsiteBondedInteractions
dim :
t_pullcoord
,
t_pbc
dimParams :
gmx::test::AwhTestParameters
dimParams_ :
gmx::DimParams
dir_ :
gmx::DataFileInfo
dispersion_shift :
NBParamGpu
,
cl_nbparam_params
disre_initf :
history_t
disre_rm3tav :
history_t
dist :
swap_compartment
distance_squared_tolerance :
gmx::shakedata
distanceIJ :
gmx::PairDistValue
distArray_ :
gmx::analysismodules::anonymous_namespace{pairdist.cpp}::PairDistanceModuleData
distccut :
methoddata_insolidangle
dlbOption :
gmx::DomdecOptions
dlbScaling :
gmx::DomdecOptions
doAll :
Nbnxm::KernelBenchOptions
dOH :
SettleWaterTopology
domain :
gmx::HardwareTopology::Device
domainGroups :
AtomDistribution
domdec_ :
gmx::DomainInfo
domdecOptions :
gmx::LegacyMdrunOptions
doNeighborSearch :
gmx::StepWorkload
donor_ :
gmx::analysismodules::anonymous_namespace{dssp.cpp}::ResInfo
donorEnergy_ :
gmx::analysismodules::anonymous_namespace{dssp.cpp}::ResInfo
doParsing_ :
gmx::ColvarProxyGromacs
doRerun_ :
gmx::LegacySimulatorData
doTestParticleInsertion_ :
Nbnxm::GridSet::DomainSetup
double_prec :
CheckpointHeaderContents
doubleToler :
gmx::test::anonymous_namespace{pairs.cpp}::ListInput
,
gmx::test::anonymous_namespace{nb_free_energy.cpp}::ListInput
dsspData_ :
gmx::analysismodules::anonymous_namespace{dssp.cpp}::DsspStorageFrame
dt :
t_UmbrellaWindow
,
UmbrellaOptions
,
anonymous_namespace{edsam.cpp}::t_edflood
,
gmx::AnalysisDataDisplacementModule::Impl
DTensors :
t_oriresdata
DTensorsEnsembleAv :
t_oriresdata
DTensorsTimeAndEnsembleAv :
t_oriresdata
dtoler :
gmx::test::anonymous_namespace{bonded.cpp}::iListInput
dtSample_ :
gmx::CorrelationGrid
dummy :
gmx_cache_protect_t
dummyMass :
VirtualSiteConfiguration
dummySelection_ :
gmx::test::ModuleTest
dummyTopology_ :
gmx::test::ModuleTest
dv :
pull_group_work_t
dvdl :
DispersionCorrection::Correction
dvdl_lin :
gmx_enerdata_t
dvdl_nonlin :
gmx_enerdata_t
dvdlambda :
gmx::test::anonymous_namespace{bonded.cpp}::OutputQuantities
dvdLambda :
gmx::test::anonymous_namespace{pairs.cpp}::OutputQuantities
,
gmx::test::anonymous_namespace{nb_free_energy.cpp}::OutputQuantities
dxdf :
gmx::VsiteThread
dynamicGroup0 :
pull_coord_work_t
dynamicPruneTime :
gmx_wallclock_gpu_nbnxn_t
Generated on Fri May 17 2024 23:20:31 for Gromacs by
1.8.5