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- s -
safe_exp() :
expfit.cpp
safe_expm1() :
expfit.cpp
save_calloc() :
smalloc.h
save_calloc_aligned() :
smalloc.h
save_free() :
smalloc.h
save_free_aligned() :
smalloc.h
save_malloc() :
smalloc.h
save_malloc_aligned() :
smalloc.h
save_realloc() :
smalloc.h
sc_iClusterSize() :
nbnxm_simd.h
search_str() :
strdb.h
searchCumulative() :
gmx_wham.cpp
searchResidueDatabase() :
resall.h
selectGatherKernelPtr() :
pme_gpu_internal.cpp
selectInteractions() :
listed_forces.cpp
selectSplineAndSpreadKernelPtr() :
pme_gpu_internal.cpp
selectSplineKernelPtr() :
pme_gpu_internal.cpp
selectSpreadKernelPtr() :
pme_gpu_internal.cpp
serializeDeviceInformations() :
device_management.h
,
device_management_common.cpp
set() :
parser_internal.h
set_atoms() :
indexutil.cpp
set_box_rel() :
state.h
set_cg_boundaries() :
partition.cpp
set_dd_cell_sizes() :
cellsizes.h
set_dd_cell_sizes_slb() :
cellsizes.h
set_dd_corners() :
partition.cpp
set_dd_dim() :
domdec_setup.cpp
set_dd_dlb_max_cutoff() :
dlb.h
,
partition.cpp
set_ddbox() :
box.h
,
box.cpp
set_ddbox_cr() :
box.cpp
,
box.h
set_dlb_limits() :
dlb.cpp
,
dlb.h
set_empty() :
parser_internal.h
set_evaluation_function() :
compiler.cpp
set_expr_value_store() :
params.cpp
set_over_alloc_dd() :
smalloc.h
set_pbc() :
pbc.cpp
set_pbc_dd() :
pbc.cpp
set_pbc_simd() :
pbc_simd.h
set_pos_method_flags() :
sm_position.cpp
set_poscalc_maxindex() :
poscalc.cpp
set_poscoll_pos() :
sm_position.cpp
set_refpos_type() :
parsetree.cpp
set_tric_dir() :
box.cpp
set_zones_numHomeAtoms() :
partition.cpp
set_zones_size() :
partition.cpp
setActiveDevice() :
device_management.cpp
,
device_management.h
,
device_management_hip.cpp
,
device_management_ocl.cpp
,
device_management_sycl.cpp
setBoxDeformationRate() :
pbc.cpp
setDynamicPairlistPruningParameters() :
pairlist_tuning.cpp
setKernelPointers() :
pme_gpu_program_impl_sycl.cpp
setPbcAiuc() :
pbc_aiuc.h
setPrevStepPullCom() :
pull.h
setPrevStepPullComFromState() :
pull_internal.h
setRandomBsWeights() :
gmx_wham.cpp
setup_acc_wham() :
gmx_wham.cpp
setup_base() :
poscalc.cpp
setup_bonded_threading() :
manage_threading.cpp
,
manage_threading.h
setup_coordinate_communication() :
pme.cpp
setup_dd_communication() :
partition.cpp
setup_memory_pooling() :
compiler.cpp
setup_specat_communication() :
domdec_specatomcomm.cpp
,
domdec_specatomcomm.h
setup_tab() :
gmx_wham.cpp
setupDynamicPairlistPruning() :
pairlist_tuning.cpp
,
pairlist_tuning.h
setupGpuDevicePeerAccess() :
gpu_utils.h
,
gpu_utils_hip.cpp
,
gpu_utils_impl.cpp
sffn2effn() :
expfit.h
,
expfit.cpp
should_merge() :
poscalc.cpp
smoothIact() :
gmx_wham.cpp
snew_bc() :
broadcaststructs.h
sortMoleculesIntoCompartments() :
swapcoords.cpp
sp_header() :
minimize.cpp
sph_distc() :
sm_insolidangle.cpp
spread_charges() :
pme_spread_sycl.cpp
ssaupd() :
gmx_arpack.h
sseupd() :
gmx_arpack.h
startGpuProfiler() :
gpu_utils_impl.cpp
,
gpu_utils_hip.cpp
,
gpu_utils.h
stopGpuProfiler() :
gpu_utils_hip.cpp
,
gpu_utils.h
,
gpu_utils_impl.cpp
store_param_val() :
compiler.cpp
store_surface_point() :
sm_insolidangle.cpp
str_to_int64_t() :
cstringutil.h
strip_comment() :
cstringutil.h
subGroupBarrier() :
sycl_kernel_utils.h
submit() :
pme_gpu_grid_sycl.cpp
sum_forces() :
pme_gpu.cpp
sumForceComponents() :
pme_gather_sycl.cpp
supportsDynamicPairlistGenerationInterval() :
pairlist_tuning.cpp
swap_em_state() :
minimize.cpp
switch_to_stage1() :
pme_load_balancing.cpp
symmetrizeProfile() :
gmx_wham.cpp
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