#include "gmxpre.h"
#include "extract_cluster.h"
#include <cstdio>
#include <filesystem>
#include <memory>
#include <optional>
#include <string>
#include <vector>
#include "gromacs/coordinateio/coordinatefile.h"
#include "gromacs/coordinateio/requirements.h"
#include "gromacs/fileio/trxio.h"
#include "gromacs/options/filenameoption.h"
#include "gromacs/options/ioptionscontainer.h"
#include "gromacs/options/optionfiletype.h"
#include "gromacs/selection/selection.h"
#include "gromacs/selection/selectionoption.h"
#include "gromacs/topology/atoms.h"
#include "gromacs/topology/index.h"
#include "gromacs/trajectoryanalysis/analysissettings.h"
#include "gromacs/trajectoryanalysis/topologyinformation.h"
#include "gromacs/utility/arrayref.h"
#include "gromacs/utility/basedefinitions.h"
#include "gromacs/utility/path.h"
#include "gromacs/utility/stringutil.h"

Include dependency graph for extract_cluster.cpp:

Description

Implements gmx::analysismodules::ExtractCluster.

Author: Paul Bauer paul..nosp@m.baue.nosp@m.r.q@g.nosp@m.mail.nosp@m..com