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- p -
packCoordinatesTemplated() :
gmx::anonymous_namespace{haloexchange.cpp}
pageSize() :
gmx
pairCountWithinCutoff() :
gmx
parseCgroup1CpuLimit() :
gmx::anonymous_namespace{hardwaretopology.cpp}
parseCgroup2CpuLimit() :
gmx::anonymous_namespace{hardwaretopology.cpp}
parseCpuInfo() :
gmx::anonymous_namespace{hardwaretopology.cpp}
parseCpuString() :
gmx::anonymous_namespace{hardwaretopology.cpp}
parsedArrayFromInputString() :
gmx
parseGpuDeviceIdentifierList() :
gmx
parseProcCpuInfo() :
gmx::anonymous_namespace{cpuinfo.cpp}
parseSysFsCpuTopology() :
gmx::anonymous_namespace{hardwaretopology.cpp}
parseUserGpuIdString() :
gmx
parseUserTaskAssignmentString() :
gmx
pbc_rvec_sub() :
anonymous_namespace{bonded.cpp}
,
gmx
pbcDDCoord() :
gmx::anonymous_namespace{haloexchangesetup.cpp}
pcomp() :
gmx
performExclusiveScan() :
gmx
pick_nbnxn_kernel() :
gmx
pick_nbnxn_kernel_cpu() :
gmx
placeCoordinatesWithCOMInBox() :
gmx
plainAssertHelper() :
gmx::test
pme_gpu_transform_spline_atom_data() :
gmx::test
pmeCorrDerivative() :
gmx::test::anonymous_namespace{splinetable.cpp}
pmeCorrF() :
gmx
pmeCorrFunction() :
gmx::test::anonymous_namespace{splinetable.cpp}
pmeFinalizeTest() :
gmx::test
pmeForceCorrection() :
gmx
pmeForceCorrectionSingleAccuracy() :
gmx
pmeGetComplexGrid() :
gmx::test
pmeGetComplexGridInternal() :
gmx::test
pmeGetComplexGridSizesInternal() :
gmx::test
pmeGetGridAndSizesInternal() :
gmx::test
pmeGetGridAndSizesInternal< real >() :
gmx::test
pmeGetGridAndSizesInternal< t_complex >() :
gmx::test
pmeGetGridInternal() :
gmx::test
pmeGetGridlineIndices() :
gmx::test
pmeGetGridPlainIndexInternal() :
gmx::test
pmeGetRealGrid() :
gmx::test
pmeGetRealGridInternal() :
gmx::test
pmeGetRealGridSizesInternal() :
gmx::test
pmeGetReciprocalEnergyAndVirial() :
gmx::test
pmeGetSplineData() :
gmx::test
pmeGetSplineDataInternal() :
gmx::test
pmeGpuWaitAndReduce() :
gmx
pmeInitAtoms() :
gmx::test
pmeInitEmpty() :
gmx::test
pmeInitWrapper() :
gmx::test
pmePerformGather() :
gmx::test
pmePerformSolve() :
gmx::test
pmePerformSplineAndSpread() :
gmx::test
pmePotentialCorrection() :
gmx
pmePotentialCorrectionSingleAccuracy() :
gmx
pmeSetComplexGrid() :
gmx::test
pmeSetGridInternal() :
gmx::test
pmeSetGridLineIndices() :
gmx::test
pmeSetRealGrid() :
gmx::test
pmeSetSplineData() :
gmx::test
pointDistanceAlongAxis() :
gmx
pointsAlongLambdaAxis() :
gmx
pointsHaveDifferentLambda() :
gmx
populateMoleculeType() :
gmx::test::anonymous_namespace{com.cpp}
posres() :
anonymous_namespace{position_restraints.cpp}
posres_dx() :
anonymous_namespace{position_restraints.cpp}
postProcessForces() :
gmx
postProcessForceWithShiftForces() :
gmx
potentialSwitchFunction() :
gmx
potentialSwitchFunctionDerivative() :
gmx
power12() :
gmx
power3() :
gmx
power4() :
gmx
power5() :
gmx
power6() :
gmx
pr_sortblock() :
gmx
precisionToString() :
gmx::anonymous_namespace{handlerestart.cpp}
prepareAwhModule() :
gmx
prepareDefaultMdpFieldValues() :
gmx::test::anonymous_namespace{simulationdatabase.cpp}
prepareForAppending() :
gmx::anonymous_namespace{handlerestart.cpp}
prepareListsForDynamicPruning() :
gmx
prepareLogAppending() :
gmx
prepareLogFile() :
gmx
prepareMdpFieldValues() :
gmx::test
prepareMdpFileContents() :
gmx::test
pressureCouplingOptionsToString() :
gmx::test::anonymous_namespace{parrinellorahman.cpp}
print_bbsizes_simple() :
gmx
print_bbsizes_supersub() :
gmx
print_dd_statistics() :
gmx
print_IMD_error() :
gmx
printBinaryInformation() :
gmx
printCurrentStatus() :
gmx::anonymous_namespace{selectioncollection.cpp}
printFatalErrorFooter() :
gmx::internal
printFatalErrorHeader() :
gmx::internal
printFatalErrorMessage() :
gmx
printFatalErrorMessageLine() :
gmx::internal
printHdf5ErrorsDebug() :
gmx
printHelp() :
gmx::test::anonymous_namespace{testinit.cpp}
,
gmx::anonymous_namespace{selectioncollection.cpp}
printMissingInteractionsAtoms() :
gmx
printMissingInteractionsMolblock() :
gmx
printNbnxmPressureError() :
gmx
PrintTo() :
gmx::test::anonymous_namespace{constr.cpp}
,
gmx
processExceptionAsFatalError() :
gmx
processExceptionAtExit() :
gmx
processExceptionAtExitForCommandLine() :
gmx
project_to_eigvectors() :
anonymous_namespace{edsam.cpp}
projectx() :
anonymous_namespace{edsam.cpp}
promptLine() :
gmx::anonymous_namespace{selectioncollection.cpp}
propagationParametersWithConstraints() :
gmx::test
propagationParametersWithCoupling() :
gmx::test
putAtomsInBox() :
gmx::test
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