gmx::NbnxnPairlistCpu Struct Reference

#include <gromacs/nbnxm/pairlist.h>

Collaboration diagram for gmx::NbnxnPairlistCpu:

Description

Cluster pairlist type for use on CPUs.

Public Member Functions
	NbnxnPairlistCpu (int iClusterSize)

Public Attributes
gmx_cache_protect_t	cp0
	Cache protection.
int	na_ci
	The number of atoms per i-cluster.
int	na_cj
	The number of atoms per j-cluster.
real	rlist
	The radius for constructing the list.
FastVector< nbnxn_ci_t >	ci
	The i-cluster list.
FastVector< nbnxn_ci_t >	ciOuter
	The outer, unpruned i-cluster list.
JClusterList	cj
	The j-cluster list.
FastVector< nbnxn_cj_t >	cjOuter
	The outer, unpruned j-cluster list.
int	ncjInUse
	The number of j-clusters that are used by ci entries in this list, will be <= cj.list.size()
std::unique_ptr < NbnxmPairlistCpuWork >	work
	Working data storage for list construction.
gmx_cache_protect_t	cp1
	Cache protection.

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The documentation for this struct was generated from the following files:

• src/gromacs/nbnxm/pairlist.h
• src/gromacs/nbnxm/pairlist.cpp