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Gromacs
2026.0-dev-20251119-5f0a571d
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Collaboration diagram for gmx::anonymous_namespace{domainpaircomm.cpp}::DistanceCalculationInfo:Information for distance calculations between domains.
Public Attributes | |
| IVec | zoneShift = { 0, 0, 0 } |
| Whether this zone is shifted wrt zone 0 for Cartesian dimensions. | |
| bool | isTriclinic = false |
| Whether the unit cell is triclinic. | |
| ArrayRef< const RVec > | normal |
| Normals for the unit cell faces. | |
| IVec | sumSquares = { 0, 0, 0 } |
| Whether we should take into account non-orthogonal normals of faces. | |
| bool | checkMultiBodyDistance = false |
| Whether we need to check distances for multi-body interactions when selecting clusters. | |
| bool | checkTwoBodyDistance = false |
| Whether we need to check distances for two-body bonded interactions when selecting clusters. | |
| real | cutoffSquaredTwoBody1 |
| Cut-off squared for 2-body interaction distances, includes one maxAtomGroupRadius. | |
| real | cutoffSquaredMultiBody1 |
| Cut-off squared for multi-body interaction distances, includes one maxAtomGroupRadius. | |
| real | cutoffSquaredTwoBody2 |
| Cut-off squared for 2-body interaction distances, includes 2 * maxAtomGroupRadius. | |
| real | cutoffSquaredMultiBody2 |
| Cut-off squared for multi-body interaction distances, includes 2 *maxAtomGroupRadius. | |
| bool | filterBondComm = false |
1.8.5