|
| file | awh.cpp |
| |
| file | boxdeformation.cpp |
| |
| file | checkpoint.cpp |
| |
| file | comparison_helpers.h |
| |
| file | compressed_x_output.cpp |
| |
| file | constantacceleration.cpp |
| |
| file | densityfittingmodule.cpp |
| |
| file | dispersion_correction.cpp |
| |
| file | domain_decomposition.cpp |
| |
| file | energycomparison.cpp |
| |
| file | energycomparison.h |
| |
| file | energyreader.cpp |
| |
| file | energyreader.h |
| |
| file | ewaldsurfaceterm.cpp |
| |
| file | exactcontinuation.cpp |
| |
| file | expandedensemble.cpp |
| |
| file | freeenergy.cpp |
| |
| file | freezegroups.cpp |
| |
| file | grompp.cpp |
| |
| file | helpwriting.cpp |
| |
| file | initialconstraints.cpp |
| |
| file | interactiveMD.cpp |
| |
| file | mdruncomparison.h |
| |
| file | mimic.cpp |
| |
| file | minimize.cpp |
| |
| file | moduletest.cpp |
| |
| file | moduletest.h |
| |
| file | multiple_time_stepping.cpp |
| |
| file | multisim.cpp |
| |
| file | multisimtest.cpp |
| |
| file | multisimtest.h |
| |
| file | nonbonded_bench.cpp |
| |
| file | normalmodes.cpp |
| |
| file | orires.cpp |
| |
| file | outputfiles.cpp |
| |
| file | periodicactions.cpp |
| |
| file | periodicactions.h |
| |
| file | periodicactions_basic.cpp |
| |
| file | periodicactions_constraints.cpp |
| |
| file | periodicactions_coupling.cpp |
| |
| file | pmetest.cpp |
| |
| file | pull.cpp |
| |
| file | pull_rotation.cpp |
| |
| file | replicaexchange.cpp |
| |
| file | replicaexchange_equivalence.cpp |
| |
| file | rerun.cpp |
| |
| file | simple_mdrun.cpp |
| |
| file | simulator.cpp |
| |
| file | simulatorcomparison.cpp |
| |
| file | simulatorcomparison.h |
| |
| file | swapcoords.cpp |
| |
| file | tabulated_bonded_interactions.cpp |
| |
| file | termination.cpp |
| |
| file | terminationhelper.cpp |
| |
| file | terminationhelper.h |
| |
| file | tpitest.cpp |
| |
| file | trajectory_writing.cpp |
| |
| file | trajectorycomparison.cpp |
| |
| file | trajectorycomparison.h |
| |
| file | virtualsites.cpp |
| |