eneconv

Main Table of Contents

VERSION 4.5
Thu 26 Aug 2010


Description

With multiple files specified for the -f option:
Concatenates several energy files in sorted order. In case of double time frames the one in the later file is used. By specifying -settime you will be asked for the start time of each file. The input files are taken from the command line, such that the command eneconv -o fixed.edr *.edr should do the trick.

With one file specified for -f:
Reads one energy file and writes another, applying the -dt, -offset, -t0 and -settime options and converting to a different format if necessary (indicated by file extentions).

-settime is applied first, then -dt/-offset followed by -b and -e to select which frames to write.

Files

optionfilenametypedescription
-f ener.edr Input, Mult. Energy file
-o fixed.edr Output Energy file

Other options

optiontypedefaultdescription
-[no]h gmx_bool no Print help info and quit
-[no]version gmx_bool no Print version info and quit
-nice int 19 Set the nicelevel
-b real -1 First time to use
-e real -1 Last time to use
-dt real 0 Only write out frame when t MOD dt = offset
-offset real 0 Time offset for -dt option
-[no]settime gmx_bool no Change starting time interactively
-[no]sort gmx_bool yes Sort energy files (not frames)
-scalefac real 1 Multiply energy component by this factor
-[no]error gmx_bool yes Stop on errors in the file

Known problems


http://www.gromacs.org
gromacs@gromacs.org